Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Gm13786-201ENSMUST00000122371 333 ntBASIC9.28□□□□□ -0.92
Nup35Q8R4R6 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Gm37489-201ENSMUST00000191883 159 ntBASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Gm30285-201ENSMUST00000214614 422 ntBASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Gm7940-201ENSMUST00000218195 769 ntBASIC9.28□□□□□ -0.92
Nup35Q8R4R6 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Gm8399-201ENSMUST00000082300 1117 ntBASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup35Q8R4R6 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Nup35Q8R4R6 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Nup35Q8R4R6 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Nup35Q8R4R6 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Nup35Q8R4R6 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Gm23931-201ENSMUST00000103842 109 ntBASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Gm11573-201ENSMUST00000119956 394 ntBASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Gm8876-201ENSMUST00000120768 1122 ntBASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Gm4310-201ENSMUST00000177847 889 ntBASIC9.27□□□□□ -0.93
Nup35Q8R4R6 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Gm38002-201ENSMUST00000193255 180 ntBASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Gm44190-201ENSMUST00000205083 1401 ntBASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms