Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
ShfQ8CG80 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
ShfQ8CG80 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.17□□□□□ -0.78
ShfQ8CG80 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
ShfQ8CG80 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.17□□□□□ -0.78
ShfQ8CG80 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
ShfQ8CG80 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.17□□□□□ -0.78
ShfQ8CG80 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
ShfQ8CG80 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
ShfQ8CG80 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
ShfQ8CG80 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
ShfQ8CG80 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
ShfQ8CG80 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.16□□□□□ -0.78
ShfQ8CG80 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
ShfQ8CG80 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
ShfQ8CG80 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
ShfQ8CG80 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.16□□□□□ -0.78
ShfQ8CG80 Gm14127-201ENSMUST00000117906 678 ntBASIC10.16□□□□□ -0.78
ShfQ8CG80 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.16□□□□□ -0.78
ShfQ8CG80 Gm15617-201ENSMUST00000118973 771 ntBASIC10.16□□□□□ -0.78
ShfQ8CG80 Gm11573-201ENSMUST00000119956 394 ntBASIC10.16□□□□□ -0.78
ShfQ8CG80 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
ShfQ8CG80 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.16□□□□□ -0.78
ShfQ8CG80 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.16□□□□□ -0.78
ShfQ8CG80 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
ShfQ8CG80 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.16□□□□□ -0.78
ShfQ8CG80 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
ShfQ8CG80 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.16□□□□□ -0.78
ShfQ8CG80 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.16□□□□□ -0.78
ShfQ8CG80 Gm45575-201ENSMUST00000210283 548 ntBASIC10.16□□□□□ -0.78
ShfQ8CG80 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.16□□□□□ -0.78
ShfQ8CG80 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.16□□□□□ -0.78
ShfQ8CG80 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
ShfQ8CG80 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
ShfQ8CG80 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
ShfQ8CG80 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.16□□□□□ -0.78
ShfQ8CG80 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
ShfQ8CG80 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.16□□□□□ -0.78
ShfQ8CG80 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.16□□□□□ -0.78
ShfQ8CG80 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
ShfQ8CG80 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
ShfQ8CG80 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
ShfQ8CG80 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
ShfQ8CG80 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
ShfQ8CG80 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
ShfQ8CG80 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
ShfQ8CG80 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
ShfQ8CG80 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.15□□□□□ -0.78
ShfQ8CG80 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
ShfQ8CG80 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
ShfQ8CG80 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
ShfQ8CG80 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
ShfQ8CG80 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
ShfQ8CG80 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
ShfQ8CG80 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
ShfQ8CG80 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
ShfQ8CG80 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
ShfQ8CG80 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.15□□□□□ -0.78
ShfQ8CG80 Gm15711-201ENSMUST00000118889 535 ntBASIC10.15□□□□□ -0.78
ShfQ8CG80 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
ShfQ8CG80 Gm24749-201ENSMUST00000157838 343 ntBASIC10.15□□□□□ -0.78
ShfQ8CG80 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
ShfQ8CG80 Olfml3-204ENSMUST00000169286 874 ntBASIC10.15□□□□□ -0.78
ShfQ8CG80 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
ShfQ8CG80 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
ShfQ8CG80 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms