Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Gm37447-201ENSMUST00000195625 2928 ntBASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Gm7103-201ENSMUST00000195642 1852 ntBASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 AC121870.2-201ENSMUST00000214343 1870 ntBASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Gm22018-201ENSMUST00000104357 131 ntBASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Gm11500-201ENSMUST00000118237 601 ntBASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Gm11573-201ENSMUST00000119956 394 ntBASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Gm27514-201ENSMUST00000183692 110 ntBASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Gm45784-201ENSMUST00000188360 142 ntBASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Gm7653-201ENSMUST00000214567 508 ntBASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Gm10312-201ENSMUST00000078515 489 ntBASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc28bQ8CEG5 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc28bQ8CEG5 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc28bQ8CEG5 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc28bQ8CEG5 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Ccdc28bQ8CEG5 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc28bQ8CEG5 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.27□□□□□ -0.61
Ccdc28bQ8CEG5 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Ccdc28bQ8CEG5 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.27□□□□□ -0.61
Ccdc28bQ8CEG5 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.27□□□□□ -0.61
Ccdc28bQ8CEG5 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.27□□□□□ -0.61
Ccdc28bQ8CEG5 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc28bQ8CEG5 Gm3329-201ENSMUST00000159873 556 ntBASIC11.27□□□□□ -0.61
Ccdc28bQ8CEG5 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Ccdc28bQ8CEG5 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.27□□□□□ -0.61
Ccdc28bQ8CEG5 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc28bQ8CEG5 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.27□□□□□ -0.61
Ccdc28bQ8CEG5 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.27□□□□□ -0.61
Ccdc28bQ8CEG5 Gm6013-201ENSMUST00000212264 699 ntBASIC11.27□□□□□ -0.61
Ccdc28bQ8CEG5 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.27□□□□□ -0.61
Ccdc28bQ8CEG5 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ccdc28bQ8CEG5 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccdc28bQ8CEG5 Gm21115-201ENSMUST00000187565 2578 ntBASIC11.27□□□□□ -0.61
Ccdc28bQ8CEG5 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.27□□□□□ -0.61
Ccdc28bQ8CEG5 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.27□□□□□ -0.61
Ccdc28bQ8CEG5 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ccdc28bQ8CEG5 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Ccdc28bQ8CEG5 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.27□□□□□ -0.61
Ccdc28bQ8CEG5 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms