Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Aph1bQ8C7N7 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Aph1bQ8C7N7 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.27□□□□□ -0.61
Aph1bQ8C7N7 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Aph1bQ8C7N7 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Aph1bQ8C7N7 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Aph1bQ8C7N7 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Aph1bQ8C7N7 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Gm13461-201ENSMUST00000120980 662 ntBASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Gm13263-201ENSMUST00000121271 838 ntBASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Gm45856-201ENSMUST00000212752 416 ntBASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Gm10288-201ENSMUST00000084614 537 ntBASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.26□□□□□ -0.61
Aph1bQ8C7N7 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Gm17825-201ENSMUST00000206836 794 ntBASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Gm45186-201ENSMUST00000206874 478 ntBASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Gm6108-201ENSMUST00000208365 367 ntBASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Gm8385-201ENSMUST00000058999 643 ntBASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Aph1bQ8C7N7 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Aph1bQ8C7N7 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.24□□□□□ -0.61
Aph1bQ8C7N7 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Aph1bQ8C7N7 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Aph1bQ8C7N7 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Aph1bQ8C7N7 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.24□□□□□ -0.61
Aph1bQ8C7N7 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Aph1bQ8C7N7 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms