Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh19Q80TF3 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Gm25766-201ENSMUST00000104101 131 ntBASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Gm15549-201ENSMUST00000121595 622 ntBASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Gm25072-201ENSMUST00000175233 235 ntBASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Gm28745-201ENSMUST00000190069 305 ntBASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Gm44329-201ENSMUST00000197469 112 ntBASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Gm23680-201ENSMUST00000083162 164 ntBASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh19Q80TF3 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Gm16219-201ENSMUST00000120096 274 ntBASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Gm15329-201ENSMUST00000121408 155 ntBASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Gm8194-201ENSMUST00000159783 859 ntBASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Gm35638-201ENSMUST00000220724 652 ntBASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms