Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ctdp1Q7TSG2 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ctdp1Q7TSG2 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.45□□□□□ -0.42
Ctdp1Q7TSG2 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.45□□□□□ -0.42
Ctdp1Q7TSG2 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ctdp1Q7TSG2 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ctdp1Q7TSG2 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ctdp1Q7TSG2 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ctdp1Q7TSG2 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.45□□□□□ -0.42
Ctdp1Q7TSG2 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.45□□□□□ -0.42
Ctdp1Q7TSG2 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ctdp1Q7TSG2 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ctdp1Q7TSG2 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.45□□□□□ -0.42
Ctdp1Q7TSG2 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ctdp1Q7TSG2 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ctdp1Q7TSG2 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ctdp1Q7TSG2 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ctdp1Q7TSG2 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Gm4607-201ENSMUST00000206649 577 ntBASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Gm45598-202ENSMUST00000210719 986 ntBASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Gzmn-202ENSMUST00000225535 989 ntBASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ctdp1Q7TSG2 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Gm12997-201ENSMUST00000120207 640 ntBASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdp1Q7TSG2 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms