Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm15528-201ENSMUST00000117821 864 ntBASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Gm13937-201ENSMUST00000121000 988 ntBASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Gm6407-201ENSMUST00000176468 549 ntBASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Gm8492-201ENSMUST00000182375 987 ntBASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Gm43002-201ENSMUST00000200310 155 ntBASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Ubfd1Q78JW9 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.15□□□□□ -0.63
Ubfd1Q78JW9 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ubfd1Q78JW9 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Ubfd1Q78JW9 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Ubfd1Q78JW9 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Ubfd1Q78JW9 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Ubfd1Q78JW9 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.15□□□□□ -0.63
Ubfd1Q78JW9 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ubfd1Q78JW9 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ubfd1Q78JW9 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Gm15744-201ENSMUST00000161734 213 ntBASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Olfml3-204ENSMUST00000169286 874 ntBASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Gm43163-201ENSMUST00000196571 442 ntBASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Gm43058-201ENSMUST00000197645 625 ntBASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Gm42816-201ENSMUST00000198433 325 ntBASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Gm18561-201ENSMUST00000206027 804 ntBASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Ubfd1Q78JW9 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ubfd1Q78JW9 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ubfd1Q78JW9 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms