Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Gm14052-201ENSMUST00000121434 1031 ntBASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Gm11942-201ENSMUST00000180255 345 ntBASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Gm25580-201ENSMUST00000083409 327 ntBASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Snrnp40Q6PE01 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Gm23745-201ENSMUST00000104230 125 ntBASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Gm5267-201ENSMUST00000191574 1045 ntBASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Gm7939-201ENSMUST00000201233 1050 ntBASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 BC080696-201ENSMUST00000202858 1218 ntBASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Gm45094-201ENSMUST00000207013 617 ntBASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 AC174797.2-201ENSMUST00000225835 165 ntBASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms