Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Tmem184b-205ENSMUST00000228002 3315 ntBASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Adamtsl2-201ENSMUST00000091233 3612 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf220Q6PDX6 Carmil2-203ENSMUST00000213019 4194 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Gm12058-201ENSMUST00000118614 437 ntBASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 AC122881.1-201ENSMUST00000225757 2695 ntBASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Myo1a-201ENSMUST00000079590 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Rnf220Q6PDX6 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Gm42741-201ENSMUST00000201340 2278 ntBASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Gm24934-201ENSMUST00000103764 111 ntBASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Gm37201-201ENSMUST00000191845 523 ntBASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Gm42693-201ENSMUST00000196779 631 ntBASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Gm6439-201ENSMUST00000199849 862 ntBASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Rnf220Q6PDX6 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms