Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm8913-201ENSMUST00000209491 641 ntBASIC12.61□□□□□ -0.39
Ift88Q61371 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.61□□□□□ -0.39
Ift88Q61371 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.61□□□□□ -0.39
Ift88Q61371 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ift88Q61371 Gm4978-201ENSMUST00000071565 801 ntBASIC12.61□□□□□ -0.39
Ift88Q61371 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ift88Q61371 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.61□□□□□ -0.39
Ift88Q61371 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ift88Q61371 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ift88Q61371 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ift88Q61371 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ift88Q61371 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ift88Q61371 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ift88Q61371 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ift88Q61371 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ift88Q61371 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ift88Q61371 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ift88Q61371 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ift88Q61371 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.61□□□□□ -0.39
Ift88Q61371 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.61□□□□□ -0.39
Ift88Q61371 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.6□□□□□ -0.39
Ift88Q61371 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.6□□□□□ -0.39
Ift88Q61371 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.6□□□□□ -0.39
Ift88Q61371 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ift88Q61371 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ift88Q61371 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Ift88Q61371 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Ift88Q61371 Gm11663-201ENSMUST00000117888 290 ntBASIC12.6□□□□□ -0.39
Ift88Q61371 Gm13996-201ENSMUST00000118456 430 ntBASIC12.6□□□□□ -0.39
Ift88Q61371 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.6□□□□□ -0.39
Ift88Q61371 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Gm3332-201ENSMUST00000189337 928 ntBASIC12.6□□□□□ -0.39
Ift88Q61371 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.6□□□□□ -0.39
Ift88Q61371 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.6□□□□□ -0.39
Ift88Q61371 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Ift88Q61371 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Ift88Q61371 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Ift88Q61371 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.6□□□□□ -0.39
Ift88Q61371 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ift88Q61371 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ift88Q61371 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ift88Q61371 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ift88Q61371 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ift88Q61371 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ift88Q61371 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ift88Q61371 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ift88Q61371 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ift88Q61371 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ift88Q61371 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ift88Q61371 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ift88Q61371 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ift88Q61371 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ift88Q61371 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.59□□□□□ -0.39
Ift88Q61371 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ift88Q61371 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.59□□□□□ -0.39
Ift88Q61371 Gm14127-201ENSMUST00000117906 678 ntBASIC12.59□□□□□ -0.39
Ift88Q61371 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.59□□□□□ -0.39
Ift88Q61371 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Ift88Q61371 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ift88Q61371 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.59□□□□□ -0.39
Ift88Q61371 Gm10807-201ENSMUST00000177134 795 ntBASIC12.59□□□□□ -0.39
Ift88Q61371 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ift88Q61371 Gm28071-201ENSMUST00000190355 478 ntBASIC12.59□□□□□ -0.39
Ift88Q61371 Gm38151-201ENSMUST00000195085 289 ntBASIC12.59□□□□□ -0.39
Ift88Q61371 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.59□□□□□ -0.39
Ift88Q61371 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.59□□□□□ -0.39
Ift88Q61371 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ift88Q61371 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms