Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.9□□□□□ -0.66
Nr1h4Q60641 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.9□□□□□ -0.66
Nr1h4Q60641 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.9□□□□□ -0.66
Nr1h4Q60641 Rprl1-202ENSMUST00000198476 238 ntBASIC10.9□□□□□ -0.66
Nr1h4Q60641 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.9□□□□□ -0.66
Nr1h4Q60641 Gm18054-201ENSMUST00000207539 555 ntBASIC10.9□□□□□ -0.66
Nr1h4Q60641 Gm18935-201ENSMUST00000212692 664 ntBASIC10.9□□□□□ -0.66
Nr1h4Q60641 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Foxm1-202ENSMUST00000112148 2229 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.9□□□□□ -0.66
Nr1h4Q60641 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.9□□□□□ -0.66
Nr1h4Q60641 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Gm19165-201ENSMUST00000204453 1982 ntBASIC10.9□□□□□ -0.66
Nr1h4Q60641 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nr1h4Q60641 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Nr1h4Q60641 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nr1h4Q60641 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Nr1h4Q60641 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nr1h4Q60641 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nr1h4Q60641 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nr1h4Q60641 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nr1h4Q60641 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.89□□□□□ -0.67
Nr1h4Q60641 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.89□□□□□ -0.67
Nr1h4Q60641 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Gm12463-201ENSMUST00000118271 849 ntBASIC10.89□□□□□ -0.67
Nr1h4Q60641 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.89□□□□□ -0.67
Nr1h4Q60641 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.89□□□□□ -0.67
Nr1h4Q60641 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Gm8885-201ENSMUST00000189382 598 ntBASIC10.89□□□□□ -0.67
Nr1h4Q60641 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.89□□□□□ -0.67
Nr1h4Q60641 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Gm21769-201ENSMUST00000211922 111 ntBASIC10.89□□□□□ -0.67
Nr1h4Q60641 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.89□□□□□ -0.67
Nr1h4Q60641 AC159376.1-201ENSMUST00000218504 630 ntBASIC10.89□□□□□ -0.67
Nr1h4Q60641 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nr1h4Q60641 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nr1h4Q60641 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nr1h4Q60641 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nr1h4Q60641 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.88□□□□□ -0.67
Nr1h4Q60641 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.88□□□□□ -0.67
Nr1h4Q60641 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nr1h4Q60641 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nr1h4Q60641 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nr1h4Q60641 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nr1h4Q60641 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Nr1h4Q60641 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nr1h4Q60641 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Nr1h4Q60641 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Nr1h4Q60641 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Nr1h4Q60641 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Nr1h4Q60641 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Nr1h4Q60641 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Nr1h4Q60641 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms