Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Mir181d-201ENSMUST00000102383 72 ntBASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Gm14213-201ENSMUST00000119778 768 ntBASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Gm12712-201ENSMUST00000120676 801 ntBASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Gm22379-201ENSMUST00000157480 131 ntBASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Gm22846-201ENSMUST00000157706 270 ntBASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Gm17214-201ENSMUST00000164501 541 ntBASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Gm9916-201ENSMUST00000192943 1228 ntBASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Gm43172-201ENSMUST00000202139 2137 ntBASIC14.19□□□□□ -0.14
Usp48Q3V0C5 BC106175-202ENSMUST00000219344 1213 ntBASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 AC122840.1-201ENSMUST00000220915 3334 ntBASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Rubie-203ENSMUST00000227803 2430 ntBASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 AC238811.4-201ENSMUST00000178019 1246 ntBASIC14.18□□□□□ -0.14
Usp48Q3V0C5 AC238940.3-201ENSMUST00000178830 1246 ntBASIC14.18□□□□□ -0.14
Usp48Q3V0C5 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC14.18□□□□□ -0.14
Usp48Q3V0C5 AC114645.1-201ENSMUST00000215831 187 ntBASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Gm14005-208ENSMUST00000223654 681 ntBASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp48Q3V0C5 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.17□□□□□ -0.14
Usp48Q3V0C5 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Gm11619-201ENSMUST00000117474 237 ntBASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Gm37826-201ENSMUST00000195329 322 ntBASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Gm43912-201ENSMUST00000204352 538 ntBASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Gm18561-201ENSMUST00000206027 804 ntBASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 AC130477.1-201ENSMUST00000226982 420 ntBASIC14.17□□□□□ -0.14
Usp48Q3V0C5 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms