Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC9.77□□□□□ -0.85
Znf48Q3US17 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm29615-201ENSMUST00000185371 697 ntBASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm28224-201ENSMUST00000186078 697 ntBASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm29001-201ENSMUST00000186177 697 ntBASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm28292-201ENSMUST00000186593 697 ntBASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm28101-201ENSMUST00000187608 697 ntBASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm29076-201ENSMUST00000187689 697 ntBASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm28302-201ENSMUST00000187931 697 ntBASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm28646-201ENSMUST00000188220 697 ntBASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm28205-201ENSMUST00000189177 697 ntBASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm29032-201ENSMUST00000189797 697 ntBASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm28695-201ENSMUST00000190300 697 ntBASIC9.77□□□□□ -0.85
Znf48Q3US17 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm37448-201ENSMUST00000192795 697 ntBASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm38117-201ENSMUST00000194653 939 ntBASIC9.77□□□□□ -0.85
Znf48Q3US17 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC9.77□□□□□ -0.85
Znf48Q3US17 AC116797.2-202ENSMUST00000223587 1017 ntBASIC9.77□□□□□ -0.85
Znf48Q3US17 AC154849.4-201ENSMUST00000224868 365 ntBASIC9.77□□□□□ -0.85
Znf48Q3US17 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Znf48Q3US17 AC108416.1-202ENSMUST00000228927 1201 ntBASIC9.77□□□□□ -0.85
Znf48Q3US17 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Znf48Q3US17 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Znf48Q3US17 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Znf48Q3US17 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Znf48Q3US17 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Znf48Q3US17 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC9.77□□□□□ -0.85
Znf48Q3US17 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC9.77□□□□□ -0.85
Znf48Q3US17 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC9.77□□□□□ -0.85
Znf48Q3US17 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm11342-203ENSMUST00000224879 1324 ntBASIC9.77□□□□□ -0.85
Znf48Q3US17 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Znf48Q3US17 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Znf48Q3US17 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Znf48Q3US17 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Znf48Q3US17 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Znf48Q3US17 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Znf48Q3US17 Gm2128-201ENSMUST00000108009 2560 ntBASIC9.76□□□□□ -0.85
Znf48Q3US17 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Znf48Q3US17 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Znf48Q3US17 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Znf48Q3US17 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Znf48Q3US17 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Znf48Q3US17 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Znf48Q3US17 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Znf48Q3US17 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Znf48Q3US17 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Znf48Q3US17 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Znf48Q3US17 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Znf48Q3US17 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Znf48Q3US17 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Znf48Q3US17 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC9.76□□□□□ -0.85
Znf48Q3US17 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Znf48Q3US17 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC9.76□□□□□ -0.85
Znf48Q3US17 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Znf48Q3US17 Gm14957-201ENSMUST00000121069 817 ntBASIC9.76□□□□□ -0.85
Znf48Q3US17 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC9.76□□□□□ -0.85
Znf48Q3US17 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Znf48Q3US17 Gm10051-201ENSMUST00000145209 414 ntBASIC9.76□□□□□ -0.85
Znf48Q3US17 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Znf48Q3US17 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Znf48Q3US17 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC9.76□□□□□ -0.85
Znf48Q3US17 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Znf48Q3US17 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC9.76□□□□□ -0.85
Znf48Q3US17 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC9.76□□□□□ -0.85
Znf48Q3US17 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC9.76□□□□□ -0.85
Znf48Q3US17 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC9.76□□□□□ -0.85
Znf48Q3US17 Gm28926-201ENSMUST00000191063 680 ntBASIC9.76□□□□□ -0.85
Znf48Q3US17 Gm37666-201ENSMUST00000194110 866 ntBASIC9.76□□□□□ -0.85
Znf48Q3US17 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC9.76□□□□□ -0.85
Znf48Q3US17 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Znf48Q3US17 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC9.76□□□□□ -0.85
Znf48Q3US17 Gm7207-201ENSMUST00000211575 1067 ntBASIC9.76□□□□□ -0.85
Znf48Q3US17 AC134439.1-201ENSMUST00000220923 600 ntBASIC9.76□□□□□ -0.85
Znf48Q3US17 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC9.76□□□□□ -0.85
Znf48Q3US17 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Znf48Q3US17 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms