Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Trpm1Q2TV84 Gm29100-201ENSMUST00000187564 4410 ntBASIC15.86■□□□□ 0.13
Trpm1Q2TV84 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trpm1Q2TV84 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trpm1Q2TV84 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trpm1Q2TV84 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trpm1Q2TV84 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trpm1Q2TV84 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC15.86■□□□□ 0.13
Trpm1Q2TV84 Mir291b-201ENSMUST00000104838 79 ntBASIC15.86■□□□□ 0.13
Trpm1Q2TV84 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trpm1Q2TV84 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC15.86■□□□□ 0.13
Trpm1Q2TV84 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trpm1Q2TV84 Gm28032-201ENSMUST00000184104 96 ntBASIC15.86■□□□□ 0.13
Trpm1Q2TV84 Gm9515-201ENSMUST00000200276 647 ntBASIC15.86■□□□□ 0.13
Trpm1Q2TV84 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Trpm1Q2TV84 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trpm1Q2TV84 AC139155.1-201ENSMUST00000226043 444 ntBASIC15.86■□□□□ 0.13
Trpm1Q2TV84 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trpm1Q2TV84 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trpm1Q2TV84 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trpm1Q2TV84 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trpm1Q2TV84 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trpm1Q2TV84 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trpm1Q2TV84 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC15.86■□□□□ 0.13
Trpm1Q2TV84 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trpm1Q2TV84 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trpm1Q2TV84 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trpm1Q2TV84 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trpm1Q2TV84 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trpm1Q2TV84 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trpm1Q2TV84 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trpm1Q2TV84 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.85■□□□□ 0.13
Trpm1Q2TV84 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trpm1Q2TV84 Gm5291-201ENSMUST00000201965 899 ntBASIC15.85■□□□□ 0.13
Trpm1Q2TV84 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trpm1Q2TV84 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trpm1Q2TV84 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trpm1Q2TV84 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trpm1Q2TV84 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trpm1Q2TV84 AC109214.1-201ENSMUST00000219520 1372 ntBASIC15.85■□□□□ 0.13
Trpm1Q2TV84 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Gm45124-201ENSMUST00000206723 2755 ntBASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Gm4960-201ENSMUST00000182928 1001 ntBASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Gm42617-201ENSMUST00000197640 1229 ntBASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Saa-ps-201ENSMUST00000211148 320 ntBASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Gm8768-201ENSMUST00000220020 826 ntBASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Gm3791-201ENSMUST00000220790 768 ntBASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Atf7-201ENSMUST00000096143 390 ntBASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Gm43172-201ENSMUST00000202139 2137 ntBASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trpm1Q2TV84 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trpm1Q2TV84 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trpm1Q2TV84 BB187690-201ENSMUST00000198619 1176 ntBASIC15.83■□□□□ 0.13
Trpm1Q2TV84 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC15.83■□□□□ 0.13
Trpm1Q2TV84 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC15.83■□□□□ 0.13
Trpm1Q2TV84 AC161172.1-201ENSMUST00000227801 486 ntBASIC15.83■□□□□ 0.13
Trpm1Q2TV84 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
Trpm1Q2TV84 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trpm1Q2TV84 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trpm1Q2TV84 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trpm1Q2TV84 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trpm1Q2TV84 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trpm1Q2TV84 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trpm1Q2TV84 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trpm1Q2TV84 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trpm1Q2TV84 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Trpm1Q2TV84 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trpm1Q2TV84 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trpm1Q2TV84 Gm20633-201ENSMUST00000176742 2831 ntBASIC15.83■□□□□ 0.12
Trpm1Q2TV84 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms