Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf1Q07802 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf1Q07802 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.62□□□□□ -0.55
Ebf1Q07802 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.62□□□□□ -0.55
Ebf1Q07802 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Ebf1Q07802 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ebf1Q07802 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf1Q07802 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ebf1Q07802 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.61□□□□□ -0.55
Ebf1Q07802 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.61□□□□□ -0.55
Ebf1Q07802 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Ebf1Q07802 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ebf1Q07802 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC11.61□□□□□ -0.55
Ebf1Q07802 Gm10169-201ENSMUST00000121822 348 ntBASIC11.61□□□□□ -0.55
Ebf1Q07802 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC11.61□□□□□ -0.55
Ebf1Q07802 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.61□□□□□ -0.55
Ebf1Q07802 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 Gm18059-201ENSMUST00000208073 580 ntBASIC11.61□□□□□ -0.55
Ebf1Q07802 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.61□□□□□ -0.55
Ebf1Q07802 AC168279.1-201ENSMUST00000214611 382 ntBASIC11.61□□□□□ -0.55
Ebf1Q07802 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.61□□□□□ -0.55
Ebf1Q07802 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.61□□□□□ -0.55
Ebf1Q07802 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.61□□□□□ -0.55
Ebf1Q07802 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.61□□□□□ -0.55
Ebf1Q07802 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ebf1Q07802 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Ebf1Q07802 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Ebf1Q07802 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ebf1Q07802 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.61□□□□□ -0.55
Ebf1Q07802 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ebf1Q07802 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Ebf1Q07802 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf1Q07802 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf1Q07802 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf1Q07802 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf1Q07802 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf1Q07802 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.6□□□□□ -0.55
Ebf1Q07802 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf1Q07802 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf1Q07802 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf1Q07802 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf1Q07802 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf1Q07802 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf1Q07802 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf1Q07802 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.6□□□□□ -0.55
Ebf1Q07802 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf1Q07802 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf1Q07802 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ebf1Q07802 Gm13549-201ENSMUST00000118339 796 ntBASIC11.6□□□□□ -0.55
Ebf1Q07802 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf1Q07802 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf1Q07802 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.6□□□□□ -0.55
Ebf1Q07802 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Ebf1Q07802 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC11.6□□□□□ -0.55
Ebf1Q07802 Gm4862-201ENSMUST00000170405 438 ntBASIC11.6□□□□□ -0.55
Ebf1Q07802 Gm20392-201ENSMUST00000173047 701 ntBASIC11.6□□□□□ -0.55
Ebf1Q07802 Gm3726-201ENSMUST00000203110 785 ntBASIC11.6□□□□□ -0.55
Ebf1Q07802 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC11.6□□□□□ -0.55
Ebf1Q07802 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.6□□□□□ -0.55
Ebf1Q07802 AC126799.1-201ENSMUST00000221976 246 ntBASIC11.6□□□□□ -0.55
Ebf1Q07802 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.6□□□□□ -0.55
Ebf1Q07802 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.6□□□□□ -0.55
Ebf1Q07802 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ebf1Q07802 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ebf1Q07802 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Ebf1Q07802 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ebf1Q07802 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.6□□□□□ -0.55
Ebf1Q07802 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf1Q07802 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.6□□□□□ -0.55
Ebf1Q07802 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf1Q07802 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf1Q07802 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf1Q07802 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf1Q07802 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.6□□□□□ -0.55
Ebf1Q07802 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ebf1Q07802 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms