Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Smarcc1P97496 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcc1P97496 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.3□□□□□ -0.12
Smarcc1P97496 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.3□□□□□ -0.12
Smarcc1P97496 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc1P97496 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.3□□□□□ -0.12
Smarcc1P97496 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Smarcc1P97496 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc1P97496 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc1P97496 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc1P97496 Snord23-201ENSMUST00000116828 109 ntBASIC14.3□□□□□ -0.12
Smarcc1P97496 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC14.3□□□□□ -0.12
Smarcc1P97496 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC14.3□□□□□ -0.12
Smarcc1P97496 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC14.3□□□□□ -0.12
Smarcc1P97496 Gm23675-201ENSMUST00000157311 125 ntBASIC14.3□□□□□ -0.12
Smarcc1P97496 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC14.3□□□□□ -0.12
Smarcc1P97496 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc1P97496 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC14.3□□□□□ -0.12
Smarcc1P97496 Gm37197-201ENSMUST00000195607 401 ntBASIC14.3□□□□□ -0.12
Smarcc1P97496 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Smarcc1P97496 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc1P97496 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc1P97496 Gm5449-201ENSMUST00000081132 357 ntBASIC14.3□□□□□ -0.12
Smarcc1P97496 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc1P97496 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.3□□□□□ -0.12
Smarcc1P97496 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc1P97496 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc1P97496 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc1P97496 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc1P97496 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc1P97496 Gm6170-201ENSMUST00000187672 1388 ntBASIC14.3□□□□□ -0.12
Smarcc1P97496 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc1P97496 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.3□□□□□ -0.12
Smarcc1P97496 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc1P97496 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc1P97496 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc1P97496 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Smarcc1P97496 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.3□□□□□ -0.12
Smarcc1P97496 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcc1P97496 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC14.29□□□□□ -0.12
Smarcc1P97496 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Gm37014-201ENSMUST00000194723 2253 ntBASIC14.29□□□□□ -0.12
Smarcc1P97496 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Gm23745-201ENSMUST00000104230 125 ntBASIC14.29□□□□□ -0.12
Smarcc1P97496 Gm11475-201ENSMUST00000118482 476 ntBASIC14.29□□□□□ -0.12
Smarcc1P97496 Gm16459-201ENSMUST00000121443 686 ntBASIC14.29□□□□□ -0.12
Smarcc1P97496 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Gm7069-201ENSMUST00000182418 1008 ntBASIC14.29□□□□□ -0.12
Smarcc1P97496 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC14.29□□□□□ -0.12
Smarcc1P97496 Gm45527-201ENSMUST00000211052 774 ntBASIC14.29□□□□□ -0.12
Smarcc1P97496 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC14.29□□□□□ -0.12
Smarcc1P97496 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC14.29□□□□□ -0.12
Smarcc1P97496 CT025689.1-201ENSMUST00000225214 283 ntBASIC14.29□□□□□ -0.12
Smarcc1P97496 AC174797.2-201ENSMUST00000225835 165 ntBASIC14.29□□□□□ -0.12
Smarcc1P97496 AC137871.1-201ENSMUST00000228278 475 ntBASIC14.29□□□□□ -0.12
Smarcc1P97496 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Gm5171-201ENSMUST00000214944 1415 ntBASIC14.29□□□□□ -0.12
Smarcc1P97496 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Smarcc1P97496 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC14.29□□□□□ -0.12
Smarcc1P97496 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Smarcc1P97496 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcc1P97496 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC14.29□□□□□ -0.12
Smarcc1P97496 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc1P97496 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc1P97496 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Smarcc1P97496 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Smarcc1P97496 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Smarcc1P97496 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc1P97496 Gm15136-201ENSMUST00000120552 533 ntBASIC14.28□□□□□ -0.12
Smarcc1P97496 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC14.28□□□□□ -0.12
Smarcc1P97496 Mir432-201ENSMUST00000157230 75 ntBASIC14.28□□□□□ -0.12
Smarcc1P97496 Gm5529-201ENSMUST00000165691 891 ntBASIC14.28□□□□□ -0.12
Smarcc1P97496 Gm24954-201ENSMUST00000178831 110 ntBASIC14.28□□□□□ -0.12
Smarcc1P97496 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms