Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.62□□□□□ -0.39
Hmgb1P63158 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.62□□□□□ -0.39
Hmgb1P63158 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgb1P63158 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.62□□□□□ -0.39
Hmgb1P63158 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgb1P63158 Gm2965-201ENSMUST00000198365 343 ntBASIC12.62□□□□□ -0.39
Hmgb1P63158 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgb1P63158 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.62□□□□□ -0.39
Hmgb1P63158 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Hmgb1P63158 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.62□□□□□ -0.39
Hmgb1P63158 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.62□□□□□ -0.39
Hmgb1P63158 Gm4978-201ENSMUST00000071565 801 ntBASIC12.62□□□□□ -0.39
Hmgb1P63158 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Hmgb1P63158 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgb1P63158 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hmgb1P63158 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgb1P63158 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgb1P63158 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.62□□□□□ -0.39
Hmgb1P63158 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgb1P63158 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgb1P63158 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hmgb1P63158 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgb1P63158 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hmgb1P63158 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgb1P63158 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.62□□□□□ -0.39
Hmgb1P63158 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.62□□□□□ -0.39
Hmgb1P63158 Btrc-209ENSMUST00000224478 2194 ntBASIC12.62□□□□□ -0.39
Hmgb1P63158 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgb1P63158 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.61□□□□□ -0.39
Hmgb1P63158 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Hmgb1P63158 Gm37813-201ENSMUST00000195003 3695 ntBASIC12.61□□□□□ -0.39
Hmgb1P63158 Ccdc116-202ENSMUST00000115709 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.61□□□□□ -0.39
Hmgb1P63158 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.61□□□□□ -0.39
Hmgb1P63158 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.61□□□□□ -0.39
Hmgb1P63158 Gm7584-201ENSMUST00000175829 940 ntBASIC12.61□□□□□ -0.39
Hmgb1P63158 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.61□□□□□ -0.39
Hmgb1P63158 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.61□□□□□ -0.39
Hmgb1P63158 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.61□□□□□ -0.39
Hmgb1P63158 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Hmgb1P63158 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.61□□□□□ -0.39
Hmgb1P63158 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Hmgb1P63158 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Hmgb1P63158 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.61□□□□□ -0.39
Hmgb1P63158 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Hmgb1P63158 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Hmgb1P63158 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hmgb1P63158 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.61□□□□□ -0.39
Hmgb1P63158 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.6□□□□□ -0.39
Hmgb1P63158 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Hmgb1P63158 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Hmgb1P63158 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Hmgb1P63158 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.6□□□□□ -0.39
Hmgb1P63158 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Gm6108-201ENSMUST00000208365 367 ntBASIC12.6□□□□□ -0.39
Hmgb1P63158 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.6□□□□□ -0.39
Hmgb1P63158 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.6□□□□□ -0.39
Hmgb1P63158 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Hmgb1P63158 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms