Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Gm45865-201ENSMUST00000211815 945 ntBASIC11.31□□□□□ -0.6
Crnkl1P63154 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.31□□□□□ -0.6
Crnkl1P63154 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.31□□□□□ -0.6
Crnkl1P63154 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.31□□□□□ -0.6
Crnkl1P63154 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.31□□□□□ -0.6
Crnkl1P63154 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crnkl1P63154 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Crnkl1P63154 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crnkl1P63154 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crnkl1P63154 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Crnkl1P63154 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crnkl1P63154 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crnkl1P63154 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crnkl1P63154 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crnkl1P63154 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crnkl1P63154 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.31□□□□□ -0.6
Crnkl1P63154 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crnkl1P63154 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Crnkl1P63154 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crnkl1P63154 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crnkl1P63154 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Crnkl1P63154 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crnkl1P63154 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crnkl1P63154 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crnkl1P63154 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crnkl1P63154 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crnkl1P63154 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crnkl1P63154 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.3□□□□□ -0.6
Crnkl1P63154 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC11.3□□□□□ -0.6
Crnkl1P63154 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crnkl1P63154 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Crnkl1P63154 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Crnkl1P63154 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Crnkl1P63154 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.3□□□□□ -0.6
Crnkl1P63154 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Crnkl1P63154 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.3□□□□□ -0.6
Crnkl1P63154 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Crnkl1P63154 Mir6420-201ENSMUST00000185032 102 ntBASIC11.3□□□□□ -0.6
Crnkl1P63154 Gm38241-201ENSMUST00000192641 898 ntBASIC11.3□□□□□ -0.6
Crnkl1P63154 Gm38314-201ENSMUST00000195709 625 ntBASIC11.3□□□□□ -0.6
Crnkl1P63154 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.3□□□□□ -0.6
Crnkl1P63154 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crnkl1P63154 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.3□□□□□ -0.6
Crnkl1P63154 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Crnkl1P63154 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.3□□□□□ -0.6
Crnkl1P63154 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crnkl1P63154 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Crnkl1P63154 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crnkl1P63154 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Crnkl1P63154 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crnkl1P63154 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crnkl1P63154 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Crnkl1P63154 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Crnkl1P63154 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Crnkl1P63154 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crnkl1P63154 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Crnkl1P63154 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Crnkl1P63154 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Crnkl1P63154 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Crnkl1P63154 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Crnkl1P63154 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Crnkl1P63154 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crnkl1P63154 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crnkl1P63154 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Crnkl1P63154 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crnkl1P63154 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crnkl1P63154 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.29□□□□□ -0.6
Crnkl1P63154 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Crnkl1P63154 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crnkl1P63154 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Crnkl1P63154 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Crnkl1P63154 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.29□□□□□ -0.6
Crnkl1P63154 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Crnkl1P63154 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.29□□□□□ -0.6
Crnkl1P63154 Gm13736-201ENSMUST00000119272 253 ntBASIC11.29□□□□□ -0.6
Crnkl1P63154 Gm14381-201ENSMUST00000122105 414 ntBASIC11.29□□□□□ -0.6
Crnkl1P63154 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Crnkl1P63154 Gm38341-201ENSMUST00000195357 515 ntBASIC11.29□□□□□ -0.6
Crnkl1P63154 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.29□□□□□ -0.6
Crnkl1P63154 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.29□□□□□ -0.6
Crnkl1P63154 Gm21769-201ENSMUST00000211922 111 ntBASIC11.29□□□□□ -0.6
Crnkl1P63154 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.29□□□□□ -0.6
Crnkl1P63154 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.29□□□□□ -0.6
Crnkl1P63154 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crnkl1P63154 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.29□□□□□ -0.6
Crnkl1P63154 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Crnkl1P63154 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.29□□□□□ -0.6
Crnkl1P63154 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Crnkl1P63154 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crnkl1P63154 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Crnkl1P63154 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Crnkl1P63154 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Crnkl1P63154 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Crnkl1P63154 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Crnkl1P63154 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crnkl1P63154 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crnkl1P63154 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crnkl1P63154 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Crnkl1P63154 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Crnkl1P63154 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms