Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Lmo4P61969 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Lmo4P61969 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Lmo4P61969 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Lmo4P61969 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC9.21□□□□□ -0.93
Lmo4P61969 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Lmo4P61969 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Lmo4P61969 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Lmo4P61969 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Lmo4P61969 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Lmo4P61969 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.21□□□□□ -0.93
Lmo4P61969 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Lmo4P61969 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Lmo4P61969 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Lmo4P61969 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Lmo4P61969 Gm13549-201ENSMUST00000118339 796 ntBASIC9.21□□□□□ -0.94
Lmo4P61969 Gm14497-201ENSMUST00000119537 580 ntBASIC9.21□□□□□ -0.94
Lmo4P61969 Gm12783-201ENSMUST00000121425 397 ntBASIC9.21□□□□□ -0.94
Lmo4P61969 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC9.21□□□□□ -0.94
Lmo4P61969 Gm25830-201ENSMUST00000158923 132 ntBASIC9.21□□□□□ -0.94
Lmo4P61969 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Lmo4P61969 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Lmo4P61969 Mrip-ps-201ENSMUST00000184613 940 ntBASIC9.21□□□□□ -0.94
Lmo4P61969 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC9.21□□□□□ -0.94
Lmo4P61969 Gm9353-201ENSMUST00000200472 604 ntBASIC9.21□□□□□ -0.94
Lmo4P61969 AC168279.1-201ENSMUST00000214611 382 ntBASIC9.21□□□□□ -0.94
Lmo4P61969 Gm8255-201ENSMUST00000218693 305 ntBASIC9.21□□□□□ -0.94
Lmo4P61969 Gm9102-201ENSMUST00000219250 465 ntBASIC9.21□□□□□ -0.94
Lmo4P61969 Gm10020-201ENSMUST00000081993 612 ntBASIC9.21□□□□□ -0.94
Lmo4P61969 Gm25580-201ENSMUST00000083409 327 ntBASIC9.21□□□□□ -0.94
Lmo4P61969 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Lmo4P61969 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Lmo4P61969 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Lmo4P61969 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Lmo4P61969 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Lmo4P61969 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Lmo4P61969 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
Lmo4P61969 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Lmo4P61969 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Lmo4P61969 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Lmo4P61969 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Lmo4P61969 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Lmo4P61969 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Lmo4P61969 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Lmo4P61969 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Lmo4P61969 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Lmo4P61969 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Lmo4P61969 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Lmo4P61969 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Lmo4P61969 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Lmo4P61969 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Lmo4P61969 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Lmo4P61969 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC9.2□□□□□ -0.94
Lmo4P61969 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC9.2□□□□□ -0.94
Lmo4P61969 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
Lmo4P61969 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Lmo4P61969 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Lmo4P61969 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Lmo4P61969 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
Lmo4P61969 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Lmo4P61969 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Lmo4P61969 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.2□□□□□ -0.94
Lmo4P61969 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Lmo4P61969 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Gm24791-201ENSMUST00000104284 131 ntBASIC9.2□□□□□ -0.94
Lmo4P61969 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Lmo4P61969 Gm14398-201ENSMUST00000117287 1073 ntBASIC9.2□□□□□ -0.94
Lmo4P61969 Gm12389-201ENSMUST00000117696 418 ntBASIC9.2□□□□□ -0.94
Lmo4P61969 Gm12969-201ENSMUST00000120199 1004 ntBASIC9.2□□□□□ -0.94
Lmo4P61969 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC9.2□□□□□ -0.94
Lmo4P61969 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Gm44814-201ENSMUST00000207018 434 ntBASIC9.2□□□□□ -0.94
Lmo4P61969 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Lmo4P61969 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC9.2□□□□□ -0.94
Lmo4P61969 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.2□□□□□ -0.94
Lmo4P61969 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Lmo4P61969 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Lmo4P61969 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Lmo4P61969 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Lmo4P61969 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms