Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
NcanP55066 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.02□□□□□ -0.48
NcanP55066 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
NcanP55066 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
NcanP55066 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NcanP55066 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NcanP55066 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NcanP55066 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
NcanP55066 Gm11473-201ENSMUST00000118980 359 ntBASIC12.02□□□□□ -0.49
NcanP55066 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC12.02□□□□□ -0.49
NcanP55066 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NcanP55066 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.02□□□□□ -0.49
NcanP55066 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.02□□□□□ -0.49
NcanP55066 Gm7833-201ENSMUST00000183288 990 ntBASIC12.02□□□□□ -0.49
NcanP55066 Mir8091-201ENSMUST00000183602 139 ntBASIC12.02□□□□□ -0.49
NcanP55066 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC12.02□□□□□ -0.49
NcanP55066 Gm44605-201ENSMUST00000206892 949 ntBASIC12.02□□□□□ -0.49
NcanP55066 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC12.02□□□□□ -0.49
NcanP55066 Gm9644-201ENSMUST00000212828 1183 ntBASIC12.02□□□□□ -0.49
NcanP55066 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
NcanP55066 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NcanP55066 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.02□□□□□ -0.49
NcanP55066 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NcanP55066 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NcanP55066 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
NcanP55066 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NcanP55066 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.02□□□□□ -0.49
NcanP55066 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
NcanP55066 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.02□□□□□ -0.49
NcanP55066 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.02□□□□□ -0.49
NcanP55066 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
NcanP55066 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NcanP55066 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NcanP55066 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NcanP55066 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NcanP55066 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC12.01□□□□□ -0.49
NcanP55066 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
NcanP55066 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
NcanP55066 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
NcanP55066 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
NcanP55066 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Gm16184-201ENSMUST00000162324 573 ntBASIC12.01□□□□□ -0.49
NcanP55066 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Olfml3-204ENSMUST00000169286 874 ntBASIC12.01□□□□□ -0.49
NcanP55066 Snord55-201ENSMUST00000174939 79 ntBASIC12.01□□□□□ -0.49
NcanP55066 Gm20610-201ENSMUST00000176406 587 ntTSL 5 BASIC12.01□□□□□ -0.49
NcanP55066 Gm38314-201ENSMUST00000195709 625 ntBASIC12.01□□□□□ -0.49
NcanP55066 Gm32102-201ENSMUST00000196885 241 ntBASIC12.01□□□□□ -0.49
NcanP55066 BB187690-201ENSMUST00000198619 1176 ntBASIC12.01□□□□□ -0.49
NcanP55066 Gm45090-201ENSMUST00000208775 1148 ntBASIC12.01□□□□□ -0.49
NcanP55066 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 CT009550.1-201ENSMUST00000225750 864 ntBASIC12.01□□□□□ -0.49
NcanP55066 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Gm7589-201ENSMUST00000085631 534 ntBASIC12.01□□□□□ -0.49
NcanP55066 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.01□□□□□ -0.49
NcanP55066 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
NcanP55066 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.01□□□□□ -0.49
NcanP55066 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
NcanP55066 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
NcanP55066 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NcanP55066 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
NcanP55066 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC12□□□□□ -0.49
NcanP55066 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
NcanP55066 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
NcanP55066 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NcanP55066 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12□□□□□ -0.49
NcanP55066 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NcanP55066 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NcanP55066 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NcanP55066 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12□□□□□ -0.49
NcanP55066 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NcanP55066 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
NcanP55066 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12□□□□□ -0.49
NcanP55066 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
NcanP55066 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms