Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh6P54276 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh6P54276 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh6P54276 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Msh6P54276 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC14.41□□□□□ -0.1
Msh6P54276 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Msh6P54276 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Msh6P54276 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC14.41□□□□□ -0.1
Msh6P54276 Gm4982-201ENSMUST00000160440 1098 ntBASIC14.41□□□□□ -0.1
Msh6P54276 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Msh6P54276 Gm19246-201ENSMUST00000173599 255 ntBASIC14.41□□□□□ -0.1
Msh6P54276 Gm26272-201ENSMUST00000179241 132 ntBASIC14.41□□□□□ -0.1
Msh6P54276 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Msh6P54276 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC14.41□□□□□ -0.1
Msh6P54276 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Msh6P54276 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Msh6P54276 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh6P54276 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh6P54276 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Msh6P54276 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC14.41□□□□□ -0.1
Msh6P54276 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh6P54276 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh6P54276 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh6P54276 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Msh6P54276 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msh6P54276 Paupar-201ENSMUST00000194826 3482 ntBASIC14.41□□□□□ -0.1
Msh6P54276 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh6P54276 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Msh6P54276 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Msh6P54276 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh6P54276 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.4□□□□□ -0.1
Msh6P54276 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.4□□□□□ -0.1
Msh6P54276 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh6P54276 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Msh6P54276 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh6P54276 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Msh6P54276 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Msh6P54276 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh6P54276 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh6P54276 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh6P54276 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Msh6P54276 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
Msh6P54276 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Msh6P54276 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Msh6P54276 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC14.4□□□□□ -0.1
Msh6P54276 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC14.4□□□□□ -0.1
Msh6P54276 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC14.4□□□□□ -0.1
Msh6P54276 Gm8255-201ENSMUST00000218693 305 ntBASIC14.4□□□□□ -0.1
Msh6P54276 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Msh6P54276 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh6P54276 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Msh6P54276 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh6P54276 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.4□□□□□ -0.1
Msh6P54276 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Msh6P54276 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Msh6P54276 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh6P54276 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Msh6P54276 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msh6P54276 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msh6P54276 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC14.39□□□□□ -0.11
Msh6P54276 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msh6P54276 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC14.39□□□□□ -0.11
Msh6P54276 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msh6P54276 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msh6P54276 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Msh6P54276 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Msh6P54276 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Msh6P54276 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msh6P54276 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Msh6P54276 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msh6P54276 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Msh6P54276 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Msh6P54276 Snord17-201ENSMUST00000104526 238 ntBASIC14.39□□□□□ -0.11
Msh6P54276 Gm13039-201ENSMUST00000118638 794 ntBASIC14.39□□□□□ -0.11
Msh6P54276 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
Msh6P54276 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC14.39□□□□□ -0.11
Msh6P54276 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC14.39□□□□□ -0.11
Msh6P54276 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC14.39□□□□□ -0.11
Msh6P54276 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Msh6P54276 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC14.39□□□□□ -0.11
Msh6P54276 AC138716.2-201ENSMUST00000226670 1016 ntBASIC14.39□□□□□ -0.11
Msh6P54276 Capsl-202ENSMUST00000226688 739 ntBASIC14.39□□□□□ -0.11
Msh6P54276 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msh6P54276 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Msh6P54276 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msh6P54276 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msh6P54276 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC14.39□□□□□ -0.11
Msh6P54276 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msh6P54276 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.39□□□□□ -0.11
Msh6P54276 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Msh6P54276 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msh6P54276 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msh6P54276 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msh6P54276 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC14.39□□□□□ -0.11
Msh6P54276 Gm7964-201ENSMUST00000051522 1378 ntBASIC14.39□□□□□ -0.11
Msh6P54276 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms