Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdx1P52946 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdx1P52946 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pdx1P52946 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdx1P52946 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.28□□□□□ -0.6
Pdx1P52946 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pdx1P52946 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdx1P52946 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdx1P52946 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdx1P52946 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdx1P52946 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pdx1P52946 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdx1P52946 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdx1P52946 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
Pdx1P52946 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdx1P52946 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pdx1P52946 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Pdx1P52946 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.27□□□□□ -0.6
Pdx1P52946 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Pdx1P52946 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pdx1P52946 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Pdx1P52946 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.27□□□□□ -0.6
Pdx1P52946 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pdx1P52946 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Pdx1P52946 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.27□□□□□ -0.61
Pdx1P52946 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pdx1P52946 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pdx1P52946 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pdx1P52946 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.27□□□□□ -0.61
Pdx1P52946 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.27□□□□□ -0.61
Pdx1P52946 Gm23045-201ENSMUST00000175041 96 ntBASIC11.27□□□□□ -0.61
Pdx1P52946 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.27□□□□□ -0.61
Pdx1P52946 Gm9211-201ENSMUST00000182882 975 ntBASIC11.27□□□□□ -0.61
Pdx1P52946 Gm43852-201ENSMUST00000202098 917 ntBASIC11.27□□□□□ -0.61
Pdx1P52946 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.27□□□□□ -0.61
Pdx1P52946 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.27□□□□□ -0.61
Pdx1P52946 Gm45856-201ENSMUST00000212752 416 ntBASIC11.27□□□□□ -0.61
Pdx1P52946 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pdx1P52946 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pdx1P52946 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pdx1P52946 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pdx1P52946 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pdx1P52946 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.27□□□□□ -0.61
Pdx1P52946 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pdx1P52946 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pdx1P52946 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pdx1P52946 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pdx1P52946 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.27□□□□□ -0.61
Pdx1P52946 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.27□□□□□ -0.61
Pdx1P52946 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pdx1P52946 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.27□□□□□ -0.61
Pdx1P52946 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Pdx1P52946 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.27□□□□□ -0.61
Pdx1P52946 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.26□□□□□ -0.61
Pdx1P52946 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.26□□□□□ -0.61
Pdx1P52946 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Pdx1P52946 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.26□□□□□ -0.61
Pdx1P52946 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.26□□□□□ -0.61
Pdx1P52946 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.26□□□□□ -0.61
Pdx1P52946 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.26□□□□□ -0.61
Pdx1P52946 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.26□□□□□ -0.61
Pdx1P52946 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.26□□□□□ -0.61
Pdx1P52946 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.26□□□□□ -0.61
Pdx1P52946 Olfml3-204ENSMUST00000169286 874 ntBASIC11.26□□□□□ -0.61
Pdx1P52946 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Pdx1P52946 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.26□□□□□ -0.61
Pdx1P52946 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.26□□□□□ -0.61
Pdx1P52946 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Pdx1P52946 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.26□□□□□ -0.61
Pdx1P52946 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pdx1P52946 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.25□□□□□ -0.61
Pdx1P52946 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms