Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Prox1P48437 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.97□□□□□ -0.65
Prox1P48437 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Prox1P48437 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.97□□□□□ -0.65
Prox1P48437 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.97□□□□□ -0.65
Prox1P48437 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.97□□□□□ -0.65
Prox1P48437 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.97□□□□□ -0.65
Prox1P48437 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Prox1P48437 Gm6439-201ENSMUST00000199849 862 ntBASIC10.97□□□□□ -0.65
Prox1P48437 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Gm10608-202ENSMUST00000213924 676 ntBASIC10.97□□□□□ -0.65
Prox1P48437 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.97□□□□□ -0.65
Prox1P48437 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.97□□□□□ -0.65
Prox1P48437 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC10.97□□□□□ -0.65
Prox1P48437 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.97□□□□□ -0.65
Prox1P48437 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.97□□□□□ -0.65
Prox1P48437 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.97□□□□□ -0.65
Prox1P48437 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Prox1P48437 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Prox1P48437 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Prox1P48437 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Prox1P48437 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prox1P48437 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Prox1P48437 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prox1P48437 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prox1P48437 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prox1P48437 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Prox1P48437 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prox1P48437 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.96□□□□□ -0.65
Prox1P48437 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prox1P48437 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prox1P48437 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prox1P48437 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.96□□□□□ -0.65
Prox1P48437 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.96□□□□□ -0.65
Prox1P48437 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prox1P48437 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prox1P48437 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prox1P48437 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prox1P48437 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Prox1P48437 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Prox1P48437 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Prox1P48437 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prox1P48437 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Prox1P48437 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Prox1P48437 Gm14644-201ENSMUST00000116671 647 ntBASIC10.96□□□□□ -0.65
Prox1P48437 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Prox1P48437 Gm15547-201ENSMUST00000122152 333 ntBASIC10.96□□□□□ -0.65
Prox1P48437 Gm13786-201ENSMUST00000122371 333 ntBASIC10.96□□□□□ -0.65
Prox1P48437 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Prox1P48437 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.96□□□□□ -0.65
Prox1P48437 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Prox1P48437 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.96□□□□□ -0.65
Prox1P48437 Gm4959-201ENSMUST00000197271 1044 ntBASIC10.96□□□□□ -0.65
Prox1P48437 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.96□□□□□ -0.65
Prox1P48437 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Prox1P48437 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.96□□□□□ -0.65
Prox1P48437 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prox1P48437 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prox1P48437 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Prox1P48437 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prox1P48437 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prox1P48437 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prox1P48437 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prox1P48437 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.96□□□□□ -0.66
Prox1P48437 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prox1P48437 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.96□□□□□ -0.66
Prox1P48437 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Prox1P48437 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prox1P48437 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.95□□□□□ -0.66
Prox1P48437 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prox1P48437 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Prox1P48437 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Prox1P48437 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.95□□□□□ -0.66
Prox1P48437 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Prox1P48437 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Prox1P48437 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Prox1P48437 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.95□□□□□ -0.66
Prox1P48437 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms