Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rfx3P48381 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rfx3P48381 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rfx3P48381 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Rfx3P48381 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.33□□□□□ -0.76
Rfx3P48381 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.33□□□□□ -0.76
Rfx3P48381 Gm6450-201ENSMUST00000200896 574 ntBASIC10.33□□□□□ -0.76
Rfx3P48381 Gm44262-201ENSMUST00000204969 372 ntBASIC10.33□□□□□ -0.76
Rfx3P48381 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rfx3P48381 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rfx3P48381 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rfx3P48381 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Rfx3P48381 Gm26448-201ENSMUST00000082446 203 ntBASIC10.33□□□□□ -0.76
Rfx3P48381 Mir433-201ENSMUST00000093564 124 ntBASIC10.33□□□□□ -0.76
Rfx3P48381 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Rfx3P48381 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rfx3P48381 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.33□□□□□ -0.76
Rfx3P48381 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Rfx3P48381 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rfx3P48381 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Rfx3P48381 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rfx3P48381 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.33□□□□□ -0.76
Rfx3P48381 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Rfx3P48381 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rfx3P48381 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Rfx3P48381 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rfx3P48381 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Rfx3P48381 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Rfx3P48381 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rfx3P48381 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.33□□□□□ -0.76
Rfx3P48381 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.33□□□□□ -0.76
Rfx3P48381 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rfx3P48381 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.32□□□□□ -0.76
Rfx3P48381 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Rfx3P48381 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.32□□□□□ -0.76
Rfx3P48381 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Rfx3P48381 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Rfx3P48381 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Rfx3P48381 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.32□□□□□ -0.76
Rfx3P48381 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.32□□□□□ -0.76
Rfx3P48381 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.32□□□□□ -0.76
Rfx3P48381 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.32□□□□□ -0.76
Rfx3P48381 Gm18038-201ENSMUST00000197900 485 ntBASIC10.32□□□□□ -0.76
Rfx3P48381 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.32□□□□□ -0.76
Rfx3P48381 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.32□□□□□ -0.76
Rfx3P48381 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.32□□□□□ -0.76
Rfx3P48381 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Rfx3P48381 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Gm9797-202ENSMUST00000218003 294 ntBASIC10.32□□□□□ -0.76
Rfx3P48381 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.32□□□□□ -0.76
Rfx3P48381 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.32□□□□□ -0.76
Rfx3P48381 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.32□□□□□ -0.76
Rfx3P48381 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.32□□□□□ -0.76
Rfx3P48381 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Rfx3P48381 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Rfx3P48381 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rfx3P48381 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.31□□□□□ -0.76
Rfx3P48381 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.31□□□□□ -0.76
Rfx3P48381 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Rfx3P48381 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms