Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Gli1P47806 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Gli1P47806 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Gli1P47806 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gli1P47806 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gli1P47806 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gli1P47806 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Gli1P47806 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Gli1P47806 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gli1P47806 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gli1P47806 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Gli1P47806 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gli1P47806 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gli1P47806 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.17□□□□□ -0.62
Gli1P47806 Gm12208-201ENSMUST00000122004 163 ntBASIC11.17□□□□□ -0.62
Gli1P47806 Gm11960-201ENSMUST00000122068 925 ntBASIC11.17□□□□□ -0.62
Gli1P47806 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.17□□□□□ -0.62
Gli1P47806 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.17□□□□□ -0.62
Gli1P47806 AY036118-201ENSMUST00000200021 923 ntBASIC11.17□□□□□ -0.62
Gli1P47806 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.17□□□□□ -0.62
Gli1P47806 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11.17□□□□□ -0.62
Gli1P47806 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.17□□□□□ -0.62
Gli1P47806 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.17□□□□□ -0.62
Gli1P47806 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.17□□□□□ -0.62
Gli1P47806 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gli1P47806 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gli1P47806 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Gli1P47806 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gli1P47806 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.17□□□□□ -0.62
Gli1P47806 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gli1P47806 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gli1P47806 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gli1P47806 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Gli1P47806 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Gli1P47806 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Gli1P47806 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gli1P47806 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gli1P47806 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Gli1P47806 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Gli1P47806 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gli1P47806 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Gli1P47806 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.16□□□□□ -0.62
Gli1P47806 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Gli1P47806 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Gli1P47806 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gli1P47806 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gli1P47806 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gli1P47806 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gli1P47806 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Gli1P47806 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Gli1P47806 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gli1P47806 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gli1P47806 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Gli1P47806 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gli1P47806 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Gli1P47806 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Gli1P47806 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.16□□□□□ -0.62
Gli1P47806 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.16□□□□□ -0.62
Gli1P47806 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gli1P47806 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.16□□□□□ -0.62
Gli1P47806 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.16□□□□□ -0.62
Gli1P47806 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Gli1P47806 Gm10051-201ENSMUST00000145209 414 ntBASIC11.16□□□□□ -0.62
Gli1P47806 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.16□□□□□ -0.62
Gli1P47806 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.16□□□□□ -0.62
Gli1P47806 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Gli1P47806 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Gli1P47806 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC11.16□□□□□ -0.62
Gli1P47806 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.16□□□□□ -0.62
Gli1P47806 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gli1P47806 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gli1P47806 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gli1P47806 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.16□□□□□ -0.62
Gli1P47806 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gli1P47806 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Gli1P47806 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gli1P47806 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Gli1P47806 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.16□□□□□ -0.62
Gli1P47806 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Gli1P47806 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Gli1P47806 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Gli1P47806 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gli1P47806 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.16□□□□□ -0.62
Gli1P47806 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Gli1P47806 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gli1P47806 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Gli1P47806 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Gli1P47806 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gli1P47806 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gli1P47806 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gli1P47806 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Gli1P47806 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Gli1P47806 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Gli1P47806 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gli1P47806 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Gli1P47806 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gli1P47806 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gli1P47806 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.15□□□□□ -0.62
Gli1P47806 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.15□□□□□ -0.62
Gli1P47806 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms