Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sftpa1P35242 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Sftpa1P35242 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.56□□□□□ -0.72
Sftpa1P35242 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Sftpa1P35242 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Sftpa1P35242 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Sftpa1P35242 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.56□□□□□ -0.72
Sftpa1P35242 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.56□□□□□ -0.72
Sftpa1P35242 Gm12389-201ENSMUST00000117696 418 ntBASIC10.56□□□□□ -0.72
Sftpa1P35242 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Gm13204-201ENSMUST00000120110 821 ntBASIC10.56□□□□□ -0.72
Sftpa1P35242 Gm13981-201ENSMUST00000122360 447 ntBASIC10.56□□□□□ -0.72
Sftpa1P35242 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC10.56□□□□□ -0.72
Sftpa1P35242 Gm11942-201ENSMUST00000180255 345 ntBASIC10.56□□□□□ -0.72
Sftpa1P35242 Gm7985-201ENSMUST00000183329 981 ntBASIC10.56□□□□□ -0.72
Sftpa1P35242 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.56□□□□□ -0.72
Sftpa1P35242 Gm37452-201ENSMUST00000194416 1160 ntBASIC10.56□□□□□ -0.72
Sftpa1P35242 Gm43547-201ENSMUST00000197729 328 ntBASIC10.56□□□□□ -0.72
Sftpa1P35242 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Gm43275-201ENSMUST00000202053 1020 ntBASIC10.56□□□□□ -0.72
Sftpa1P35242 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC10.56□□□□□ -0.72
Sftpa1P35242 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Sftpa1P35242 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sftpa1P35242 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sftpa1P35242 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sftpa1P35242 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sftpa1P35242 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Sftpa1P35242 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sftpa1P35242 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.56□□□□□ -0.72
Sftpa1P35242 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.56□□□□□ -0.72
Sftpa1P35242 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sftpa1P35242 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.55□□□□□ -0.72
Sftpa1P35242 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sftpa1P35242 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Sftpa1P35242 Gm6158-201ENSMUST00000109467 904 ntBASIC10.55□□□□□ -0.72
Sftpa1P35242 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC10.55□□□□□ -0.72
Sftpa1P35242 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC10.55□□□□□ -0.72
Sftpa1P35242 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 Gm12461-201ENSMUST00000120231 1239 ntBASIC10.55□□□□□ -0.72
Sftpa1P35242 Gm15982-201ENSMUST00000121681 554 ntBASIC10.55□□□□□ -0.72
Sftpa1P35242 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.55□□□□□ -0.72
Sftpa1P35242 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.55□□□□□ -0.72
Sftpa1P35242 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC10.55□□□□□ -0.72
Sftpa1P35242 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC10.55□□□□□ -0.72
Sftpa1P35242 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 Gm7069-201ENSMUST00000182418 1008 ntBASIC10.55□□□□□ -0.72
Sftpa1P35242 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sftpa1P35242 Gm37197-201ENSMUST00000195607 401 ntBASIC10.55□□□□□ -0.72
Sftpa1P35242 Gm42511-201ENSMUST00000196160 234 ntBASIC10.55□□□□□ -0.72
Sftpa1P35242 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC10.55□□□□□ -0.72
Sftpa1P35242 Gm44814-201ENSMUST00000207018 434 ntBASIC10.55□□□□□ -0.72
Sftpa1P35242 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC10.55□□□□□ -0.72
Sftpa1P35242 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC10.55□□□□□ -0.72
Sftpa1P35242 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC10.55□□□□□ -0.72
Sftpa1P35242 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.55□□□□□ -0.72
Sftpa1P35242 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Sftpa1P35242 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms