Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.46□□□□□ -0.73
Nedd8P29595 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.46□□□□□ -0.73
Nedd8P29595 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nedd8P29595 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Nedd8P29595 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nedd8P29595 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nedd8P29595 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.46□□□□□ -0.74
Nedd8P29595 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nedd8P29595 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Nedd8P29595 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC10.46□□□□□ -0.74
Nedd8P29595 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Nedd8P29595 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Nedd8P29595 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nedd8P29595 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nedd8P29595 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nedd8P29595 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Nedd8P29595 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Nedd8P29595 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nedd8P29595 AC158779.1-201ENSMUST00000228912 3861 ntBASIC10.46□□□□□ -0.74
Nedd8P29595 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nedd8P29595 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nedd8P29595 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC10.45□□□□□ -0.74
Nedd8P29595 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 Bcl2-202ENSMUST00000189999 2841 ntBASIC10.45□□□□□ -0.74
Nedd8P29595 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Nedd8P29595 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.45□□□□□ -0.74
Nedd8P29595 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.45□□□□□ -0.74
Nedd8P29595 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Nedd8P29595 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC10.45□□□□□ -0.74
Nedd8P29595 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Nedd8P29595 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.45□□□□□ -0.74
Nedd8P29595 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.45□□□□□ -0.74
Nedd8P29595 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Nedd8P29595 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.45□□□□□ -0.74
Nedd8P29595 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 Gm22331-201ENSMUST00000158066 136 ntBASIC10.45□□□□□ -0.74
Nedd8P29595 Gm27701-201ENSMUST00000184498 110 ntBASIC10.45□□□□□ -0.74
Nedd8P29595 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.45□□□□□ -0.74
Nedd8P29595 Gm18584-201ENSMUST00000203098 964 ntBASIC10.45□□□□□ -0.74
Nedd8P29595 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.45□□□□□ -0.74
Nedd8P29595 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.45□□□□□ -0.74
Nedd8P29595 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.45□□□□□ -0.74
Nedd8P29595 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.45□□□□□ -0.74
Nedd8P29595 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.45□□□□□ -0.74
Nedd8P29595 Gm18065-201ENSMUST00000221395 526 ntBASIC10.45□□□□□ -0.74
Nedd8P29595 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.45□□□□□ -0.74
Nedd8P29595 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 Gm9996-201ENSMUST00000070359 913 ntBASIC10.45□□□□□ -0.74
Nedd8P29595 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Nedd8P29595 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Nedd8P29595 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Nedd8P29595 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 Gm44888-201ENSMUST00000209119 2541 ntBASIC10.45□□□□□ -0.74
Nedd8P29595 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nedd8P29595 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Nedd8P29595 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.44□□□□□ -0.74
Nedd8P29595 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Nedd8P29595 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.44□□□□□ -0.74
Nedd8P29595 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nedd8P29595 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nedd8P29595 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Nedd8P29595 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nedd8P29595 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nedd8P29595 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Nedd8P29595 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.44□□□□□ -0.74
Nedd8P29595 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Nedd8P29595 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Nedd8P29595 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.44□□□□□ -0.74
Nedd8P29595 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nedd8P29595 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.44□□□□□ -0.74
Nedd8P29595 AC122382.1-201ENSMUST00000225869 2371 ntBASIC10.44□□□□□ -0.74
Nedd8P29595 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nedd8P29595 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.44□□□□□ -0.74
Nedd8P29595 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.44□□□□□ -0.74
Nedd8P29595 Mir692-1-201ENSMUST00000102263 109 ntBASIC10.44□□□□□ -0.74
Nedd8P29595 Gm11573-201ENSMUST00000119956 394 ntBASIC10.44□□□□□ -0.74
Nedd8P29595 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.44□□□□□ -0.74
Nedd8P29595 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nedd8P29595 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms