Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 n-R5s143-201ENSMUST00000179542 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s107-201ENSMUST00000179704 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 Gm26391-201ENSMUST00000179843 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s110-201ENSMUST00000179995 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s128-201ENSMUST00000180096 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 n-R5s124-201ENSMUST00000180334 119 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col2a1P28481 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Col2a1P28481 Gm44498-201ENSMUST00000199509 111 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col2a1P28481 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Col2a1P28481 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col2a1P28481 Gm24089-201ENSMUST00000093696 109 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col2a1P28481 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col2a1P28481 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col2a1P28481 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Col2a1P28481 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col2a1P28481 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC12.81□□□□□ -0.36
Col2a1P28481 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Col2a1P28481 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Col2a1P28481 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col2a1P28481 Paupar-201ENSMUST00000194826 3482 ntBASIC12.81□□□□□ -0.36
Col2a1P28481 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col2a1P28481 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col2a1P28481 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col2a1P28481 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col2a1P28481 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Col2a1P28481 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.8□□□□□ -0.36
Col2a1P28481 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col2a1P28481 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Col2a1P28481 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC12.8□□□□□ -0.36
Col2a1P28481 Gm12453-201ENSMUST00000121981 331 ntBASIC12.8□□□□□ -0.36
Col2a1P28481 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col2a1P28481 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.8□□□□□ -0.36
Col2a1P28481 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC12.8□□□□□ -0.36
Col2a1P28481 Gm26782-203ENSMUST00000227103 751 ntBASIC12.8□□□□□ -0.36
Col2a1P28481 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC12.8□□□□□ -0.36
Col2a1P28481 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Col2a1P28481 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col2a1P28481 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Col2a1P28481 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col2a1P28481 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col2a1P28481 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col2a1P28481 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Col2a1P28481 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col2a1P28481 Gm11475-201ENSMUST00000118482 476 ntBASIC12.79□□□□□ -0.36
Col2a1P28481 Gm15036-201ENSMUST00000118880 400 ntBASIC12.79□□□□□ -0.36
Col2a1P28481 Gm6439-201ENSMUST00000199849 862 ntBASIC12.79□□□□□ -0.36
Col2a1P28481 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC12.79□□□□□ -0.36
Col2a1P28481 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col2a1P28481 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC12.79□□□□□ -0.36
Col2a1P28481 AC162932.1-201ENSMUST00000219209 872 ntBASIC12.79□□□□□ -0.36
Col2a1P28481 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col2a1P28481 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.79□□□□□ -0.36
Col2a1P28481 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col2a1P28481 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col2a1P28481 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Col2a1P28481 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Col2a1P28481 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col2a1P28481 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col2a1P28481 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.79□□□□□ -0.36
Col2a1P28481 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col2a1P28481 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col2a1P28481 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col2a1P28481 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Col2a1P28481 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col2a1P28481 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.78□□□□□ -0.36
Col2a1P28481 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Col2a1P28481 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms