Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgn1P18608 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgn1P18608 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgn1P18608 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.42□□□□□ -0.74
Hmgn1P18608 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Hmgn1P18608 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgn1P18608 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgn1P18608 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hmgn1P18608 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.41□□□□□ -0.74
Hmgn1P18608 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.41□□□□□ -0.74
Hmgn1P18608 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.41□□□□□ -0.74
Hmgn1P18608 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Hmgn1P18608 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
Hmgn1P18608 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.41□□□□□ -0.74
Hmgn1P18608 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.41□□□□□ -0.74
Hmgn1P18608 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.41□□□□□ -0.74
Hmgn1P18608 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.41□□□□□ -0.74
Hmgn1P18608 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.41□□□□□ -0.74
Hmgn1P18608 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.41□□□□□ -0.74
Hmgn1P18608 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.41□□□□□ -0.74
Hmgn1P18608 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.41□□□□□ -0.74
Hmgn1P18608 Gm9797-202ENSMUST00000218003 294 ntBASIC10.41□□□□□ -0.74
Hmgn1P18608 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Hmgn1P18608 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.41□□□□□ -0.74
Hmgn1P18608 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Hmgn1P18608 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hmgn1P18608 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.74
Hmgn1P18608 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.4□□□□□ -0.74
Hmgn1P18608 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Hmgn1P18608 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Hmgn1P18608 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.4□□□□□ -0.74
Hmgn1P18608 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Hmgn1P18608 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Hmgn1P18608 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.4□□□□□ -0.74
Hmgn1P18608 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Hmgn1P18608 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Gm15207-201ENSMUST00000119259 442 ntBASIC10.4□□□□□ -0.74
Hmgn1P18608 Gm11783-201ENSMUST00000119549 885 ntBASIC10.4□□□□□ -0.74
Hmgn1P18608 Gm11425-201ENSMUST00000119608 498 ntBASIC10.4□□□□□ -0.74
Hmgn1P18608 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.4□□□□□ -0.74
Hmgn1P18608 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Gm20495-201ENSMUST00000173902 235 ntBASIC10.4□□□□□ -0.74
Hmgn1P18608 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Hmgn1P18608 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.4□□□□□ -0.74
Hmgn1P18608 Gm43184-201ENSMUST00000197247 542 ntBASIC10.4□□□□□ -0.74
Hmgn1P18608 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.4□□□□□ -0.74
Hmgn1P18608 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.4□□□□□ -0.74
Hmgn1P18608 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.4□□□□□ -0.74
Hmgn1P18608 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Gm9396-201ENSMUST00000076703 567 ntBASIC10.4□□□□□ -0.74
Hmgn1P18608 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms