Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Cdx1P18111 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Gm12715-201ENSMUST00000121430 1128 ntBASIC9.27□□□□□ -0.93
Cdx1P18111 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Mir7070-201ENSMUST00000183657 86 ntBASIC9.27□□□□□ -0.93
Cdx1P18111 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC9.27□□□□□ -0.93
Cdx1P18111 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.27□□□□□ -0.93
Cdx1P18111 Gm43416-201ENSMUST00000201916 1015 ntBASIC9.27□□□□□ -0.93
Cdx1P18111 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC9.27□□□□□ -0.93
Cdx1P18111 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC9.27□□□□□ -0.93
Cdx1P18111 Gm18212-201ENSMUST00000211678 889 ntBASIC9.27□□□□□ -0.93
Cdx1P18111 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.27□□□□□ -0.93
Cdx1P18111 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Cdx1P18111 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 AC140462.2-201ENSMUST00000225718 2433 ntBASIC9.27□□□□□ -0.93
Cdx1P18111 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Cdx1P18111 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC9.27□□□□□ -0.93
Cdx1P18111 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC9.27□□□□□ -0.93
Cdx1P18111 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC9.27□□□□□ -0.93
Cdx1P18111 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Cdx1P18111 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Cdx1P18111 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Cdx1P18111 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.27□□□□□ -0.93
Cdx1P18111 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.27□□□□□ -0.93
Cdx1P18111 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cdx1P18111 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.26□□□□□ -0.93
Cdx1P18111 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cdx1P18111 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cdx1P18111 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC9.26□□□□□ -0.93
Cdx1P18111 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cdx1P18111 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cdx1P18111 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC9.26□□□□□ -0.93
Cdx1P18111 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cdx1P18111 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cdx1P18111 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cdx1P18111 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cdx1P18111 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cdx1P18111 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cdx1P18111 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cdx1P18111 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cdx1P18111 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cdx1P18111 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Cdx1P18111 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Cdx1P18111 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC9.26□□□□□ -0.93
Cdx1P18111 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cdx1P18111 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cdx1P18111 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC9.26□□□□□ -0.93
Cdx1P18111 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC9.26□□□□□ -0.93
Cdx1P18111 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC9.26□□□□□ -0.93
Cdx1P18111 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC9.26□□□□□ -0.93
Cdx1P18111 Gm44772-201ENSMUST00000207623 1191 ntBASIC9.26□□□□□ -0.93
Cdx1P18111 Gm19963-201ENSMUST00000208413 1255 ntBASIC9.26□□□□□ -0.93
Cdx1P18111 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cdx1P18111 Gm807-202ENSMUST00000224929 408 ntBASIC9.26□□□□□ -0.93
Cdx1P18111 AC126253.1-202ENSMUST00000226732 835 ntBASIC9.26□□□□□ -0.93
Cdx1P18111 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cdx1P18111 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Cdx1P18111 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Cdx1P18111 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Cdx1P18111 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC9.26□□□□□ -0.93
Cdx1P18111 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cdx1P18111 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cdx1P18111 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cdx1P18111 Gm13615-201ENSMUST00000120242 1612 ntBASIC9.26□□□□□ -0.93
Cdx1P18111 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Cdx1P18111 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Cdx1P18111 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cdx1P18111 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC9.26□□□□□ -0.93
Cdx1P18111 Gm44775-201ENSMUST00000207266 1456 ntBASIC9.26□□□□□ -0.93
Cdx1P18111 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Cdx1P18111 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC9.26□□□□□ -0.93
Cdx1P18111 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cdx1P18111 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cdx1P18111 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms