Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl3P10855 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl3P10855 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl3P10855 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Ccl3P10855 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Ccl3P10855 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccl3P10855 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Ccl3P10855 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.07□□□□□ -0.8
Ccl3P10855 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccl3P10855 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccl3P10855 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Ccl3P10855 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ccl3P10855 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ccl3P10855 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccl3P10855 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Ccl3P10855 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccl3P10855 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccl3P10855 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.07□□□□□ -0.8
Ccl3P10855 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC10.07□□□□□ -0.8
Ccl3P10855 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC10.07□□□□□ -0.8
Ccl3P10855 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ccl3P10855 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC10.07□□□□□ -0.8
Ccl3P10855 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ccl3P10855 Gm3329-201ENSMUST00000159873 556 ntBASIC10.07□□□□□ -0.8
Ccl3P10855 Gm9372-201ENSMUST00000168454 430 ntBASIC10.07□□□□□ -0.8
Ccl3P10855 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Ccl3P10855 Gm19246-201ENSMUST00000173599 255 ntBASIC10.07□□□□□ -0.8
Ccl3P10855 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccl3P10855 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ccl3P10855 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Ccl3P10855 Gm45135-201ENSMUST00000206787 1184 ntBASIC10.07□□□□□ -0.8
Ccl3P10855 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC10.07□□□□□ -0.8
Ccl3P10855 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.07□□□□□ -0.8
Ccl3P10855 AC162932.1-201ENSMUST00000219209 872 ntBASIC10.07□□□□□ -0.8
Ccl3P10855 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC10.07□□□□□ -0.8
Ccl3P10855 AC102847.1-202ENSMUST00000226313 1245 ntBASIC10.07□□□□□ -0.8
Ccl3P10855 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccl3P10855 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccl3P10855 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccl3P10855 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC10.07□□□□□ -0.8
Ccl3P10855 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccl3P10855 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccl3P10855 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ccl3P10855 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Ccl3P10855 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Ccl3P10855 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccl3P10855 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Ccl3P10855 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccl3P10855 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Ccl3P10855 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ccl3P10855 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.07□□□□□ -0.8
Ccl3P10855 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.07□□□□□ -0.8
Ccl3P10855 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.07□□□□□ -0.8
Ccl3P10855 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ccl3P10855 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.07□□□□□ -0.8
Ccl3P10855 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Ccl3P10855 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ccl3P10855 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.07□□□□□ -0.8
Ccl3P10855 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Ccl3P10855 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC10.06□□□□□ -0.8
Ccl3P10855 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC10.06□□□□□ -0.8
Ccl3P10855 Gm13981-201ENSMUST00000122360 447 ntBASIC10.06□□□□□ -0.8
Ccl3P10855 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC10.06□□□□□ -0.8
Ccl3P10855 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.06□□□□□ -0.8
Ccl3P10855 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Gm19013-201ENSMUST00000183895 1222 ntBASIC10.06□□□□□ -0.8
Ccl3P10855 Gm19014-201ENSMUST00000184828 1189 ntBASIC10.06□□□□□ -0.8
Ccl3P10855 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC10.06□□□□□ -0.8
Ccl3P10855 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.06□□□□□ -0.8
Ccl3P10855 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.06□□□□□ -0.8
Ccl3P10855 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.06□□□□□ -0.8
Ccl3P10855 Gm43969-201ENSMUST00000204833 535 ntBASIC10.06□□□□□ -0.8
Ccl3P10855 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Gm45085-201ENSMUST00000209100 441 ntBASIC10.06□□□□□ -0.8
Ccl3P10855 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC10.06□□□□□ -0.8
Ccl3P10855 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC10.06□□□□□ -0.8
Ccl3P10855 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Gm10020-201ENSMUST00000081993 612 ntBASIC10.06□□□□□ -0.8
Ccl3P10855 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Ccl3P10855 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms