Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chmp6P0C0A3 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chmp6P0C0A3 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chmp6P0C0A3 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Chmp6P0C0A3 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chmp6P0C0A3 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.46□□□□□ -0.42
Chmp6P0C0A3 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Chmp6P0C0A3 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chmp6P0C0A3 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chmp6P0C0A3 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chmp6P0C0A3 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chmp6P0C0A3 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chmp6P0C0A3 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.46□□□□□ -0.42
Chmp6P0C0A3 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.46□□□□□ -0.42
Chmp6P0C0A3 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Gm38151-201ENSMUST00000195085 289 ntBASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Gm44100-201ENSMUST00000204329 436 ntBASIC12.45□□□□□ -0.42
Chmp6P0C0A3 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Gm6867-201ENSMUST00000219165 425 ntBASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp6P0C0A3 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Gm10774-201ENSMUST00000188689 204 ntBASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.44□□□□□ -0.42
Chmp6P0C0A3 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms