Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TnfP06804 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TnfP06804 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.1□□□□□ -0.47
TnfP06804 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TnfP06804 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TnfP06804 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TnfP06804 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TnfP06804 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.1□□□□□ -0.47
TnfP06804 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TnfP06804 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.1□□□□□ -0.47
TnfP06804 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.1□□□□□ -0.47
TnfP06804 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
TnfP06804 Gm12274-201ENSMUST00000120062 385 ntBASIC12.1□□□□□ -0.47
TnfP06804 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TnfP06804 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.1□□□□□ -0.47
TnfP06804 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.1□□□□□ -0.47
TnfP06804 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.1□□□□□ -0.47
TnfP06804 Mir6958-201ENSMUST00000184207 73 ntBASIC12.1□□□□□ -0.47
TnfP06804 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.1□□□□□ -0.47
TnfP06804 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TnfP06804 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.1□□□□□ -0.47
TnfP06804 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.1□□□□□ -0.47
TnfP06804 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TnfP06804 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TnfP06804 Rgr-203ENSMUST00000225070 4704 ntBASIC12.1□□□□□ -0.47
TnfP06804 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TnfP06804 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TnfP06804 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
TnfP06804 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.1□□□□□ -0.47
TnfP06804 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TnfP06804 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TnfP06804 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TnfP06804 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TnfP06804 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TnfP06804 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TnfP06804 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TnfP06804 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.1□□□□□ -0.47
TnfP06804 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TnfP06804 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TnfP06804 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.09□□□□□ -0.47
TnfP06804 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TnfP06804 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TnfP06804 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TnfP06804 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TnfP06804 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TnfP06804 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TnfP06804 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TnfP06804 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.09□□□□□ -0.47
TnfP06804 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TnfP06804 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
TnfP06804 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TnfP06804 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.09□□□□□ -0.47
TnfP06804 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TnfP06804 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TnfP06804 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TnfP06804 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TnfP06804 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
TnfP06804 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.09□□□□□ -0.47
TnfP06804 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
TnfP06804 Gm14270-201ENSMUST00000118388 846 ntBASIC12.09□□□□□ -0.47
TnfP06804 Gm15782-201ENSMUST00000121073 445 ntBASIC12.09□□□□□ -0.47
TnfP06804 Gm12030-201ENSMUST00000121917 223 ntBASIC12.09□□□□□ -0.47
TnfP06804 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.09□□□□□ -0.47
TnfP06804 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TnfP06804 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.09□□□□□ -0.47
TnfP06804 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.09□□□□□ -0.47
TnfP06804 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.09□□□□□ -0.47
TnfP06804 Gm39288-201ENSMUST00000210554 446 ntBASIC12.09□□□□□ -0.47
TnfP06804 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TnfP06804 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
TnfP06804 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.09□□□□□ -0.47
TnfP06804 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TnfP06804 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.09□□□□□ -0.47
TnfP06804 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TnfP06804 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.09□□□□□ -0.47
TnfP06804 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TnfP06804 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TnfP06804 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TnfP06804 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TnfP06804 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TnfP06804 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TnfP06804 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TnfP06804 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TnfP06804 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TnfP06804 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.08□□□□□ -0.47
TnfP06804 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TnfP06804 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TnfP06804 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TnfP06804 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TnfP06804 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TnfP06804 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TnfP06804 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TnfP06804 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
TnfP06804 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TnfP06804 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TnfP06804 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TnfP06804 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.08□□□□□ -0.48
TnfP06804 Gm14807-201ENSMUST00000116640 983 ntBASIC12.08□□□□□ -0.48
TnfP06804 Gm22846-201ENSMUST00000157706 270 ntBASIC12.08□□□□□ -0.48
TnfP06804 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms