Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
CfdP03953 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
CfdP03953 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.88
CfdP03953 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
CfdP03953 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
CfdP03953 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
CfdP03953 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
CfdP03953 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
CfdP03953 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
CfdP03953 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
CfdP03953 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
CfdP03953 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
CfdP03953 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CfdP03953 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CfdP03953 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CfdP03953 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CfdP03953 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
CfdP03953 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
CfdP03953 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
CfdP03953 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CfdP03953 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC9.52□□□□□ -0.89
CfdP03953 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
CfdP03953 Gm8876-201ENSMUST00000120768 1122 ntBASIC9.52□□□□□ -0.89
CfdP03953 Mir1896-201ENSMUST00000122641 81 ntBASIC9.52□□□□□ -0.89
CfdP03953 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
CfdP03953 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
CfdP03953 CT025535.1-201ENSMUST00000227172 491 ntBASIC9.52□□□□□ -0.89
CfdP03953 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CfdP03953 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC9.52□□□□□ -0.89
CfdP03953 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CfdP03953 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
CfdP03953 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.52□□□□□ -0.89
CfdP03953 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CfdP03953 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CfdP03953 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
CfdP03953 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
CfdP03953 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CfdP03953 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.51□□□□□ -0.89
CfdP03953 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.51□□□□□ -0.89
CfdP03953 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Gm28581-201ENSMUST00000186086 2177 ntBASIC9.51□□□□□ -0.89
CfdP03953 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC9.51□□□□□ -0.89
CfdP03953 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC9.51□□□□□ -0.89
CfdP03953 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC9.51□□□□□ -0.89
CfdP03953 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC9.51□□□□□ -0.89
CfdP03953 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC9.51□□□□□ -0.89
CfdP03953 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC9.51□□□□□ -0.89
CfdP03953 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC9.51□□□□□ -0.89
CfdP03953 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
CfdP03953 Gm8176-201ENSMUST00000191297 1099 ntBASIC9.51□□□□□ -0.89
CfdP03953 Gm38230-201ENSMUST00000193572 1159 ntBASIC9.51□□□□□ -0.89
CfdP03953 Gm38158-201ENSMUST00000194617 339 ntBASIC9.51□□□□□ -0.89
CfdP03953 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
CfdP03953 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC9.51□□□□□ -0.89
CfdP03953 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
CfdP03953 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC9.51□□□□□ -0.89
CfdP03953 AC154462.2-201ENSMUST00000227519 370 ntBASIC9.51□□□□□ -0.89
CfdP03953 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
CfdP03953 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC9.51□□□□□ -0.89
CfdP03953 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC9.51□□□□□ -0.89
CfdP03953 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CfdP03953 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CfdP03953 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CfdP03953 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC9.5□□□□□ -0.89
CfdP03953 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms