Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.48□□□□□ -0.73
P01852 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.48□□□□□ -0.73
P01852 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01852 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
P01852 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
P01852 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.47□□□□□ -0.73
P01852 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
P01852 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.47□□□□□ -0.73
P01852 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.47□□□□□ -0.73
P01852 Gm7150-201ENSMUST00000122032 981 ntBASIC10.47□□□□□ -0.73
P01852 Gm8737-201ENSMUST00000122208 642 ntBASIC10.47□□□□□ -0.73
P01852 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.47□□□□□ -0.73
P01852 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Gm22902-201ENSMUST00000158488 302 ntBASIC10.47□□□□□ -0.73
P01852 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Mir6546-201ENSMUST00000184460 62 ntBASIC10.47□□□□□ -0.73
P01852 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.47□□□□□ -0.73
P01852 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC10.47□□□□□ -0.73
P01852 Gm43852-201ENSMUST00000202098 917 ntBASIC10.47□□□□□ -0.73
P01852 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
P01852 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
P01852 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.47□□□□□ -0.73
P01852 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
P01852 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
P01852 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.47□□□□□ -0.73
P01852 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01852 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.46□□□□□ -0.73
P01852 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
P01852 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P01852 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P01852 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
P01852 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P01852 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P01852 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.46□□□□□ -0.73
P01852 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
P01852 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
P01852 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
P01852 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
P01852 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P01852 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
P01852 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
P01852 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
P01852 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
P01852 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
P01852 Gm15881-201ENSMUST00000148792 942 ntBASIC10.46□□□□□ -0.73
P01852 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.46□□□□□ -0.73
P01852 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
P01852 Gm23045-201ENSMUST00000175041 96 ntBASIC10.46□□□□□ -0.73
P01852 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
P01852 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
P01852 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.46□□□□□ -0.73
P01852 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC10.46□□□□□ -0.73
P01852 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
P01852 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.46□□□□□ -0.73
P01852 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.46□□□□□ -0.73
P01852 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.46□□□□□ -0.73
P01852 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
P01852 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
P01852 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.46□□□□□ -0.74
P01852 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
P01852 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
P01852 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
P01852 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
P01852 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
P01852 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.46□□□□□ -0.74
P01852 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
P01852 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
P01852 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
P01852 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
P01852 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
P01852 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms