Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc1a6O35544 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Slc1a6O35544 Gm11573-201ENSMUST00000119956 394 ntBASIC11.23□□□□□ -0.61
Slc1a6O35544 Gm7150-201ENSMUST00000122032 981 ntBASIC11.23□□□□□ -0.61
Slc1a6O35544 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Slc1a6O35544 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.23□□□□□ -0.61
Slc1a6O35544 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.23□□□□□ -0.61
Slc1a6O35544 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.23□□□□□ -0.61
Slc1a6O35544 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Slc1a6O35544 Gm20495-201ENSMUST00000173902 235 ntBASIC11.23□□□□□ -0.61
Slc1a6O35544 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Slc1a6O35544 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Slc1a6O35544 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Slc1a6O35544 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.23□□□□□ -0.61
Slc1a6O35544 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc1a6O35544 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc1a6O35544 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc1a6O35544 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc1a6O35544 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Slc1a6O35544 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.23□□□□□ -0.61
Slc1a6O35544 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Slc1a6O35544 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.23□□□□□ -0.61
Slc1a6O35544 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.23□□□□□ -0.61
Slc1a6O35544 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc1a6O35544 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc1a6O35544 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc1a6O35544 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc1a6O35544 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc1a6O35544 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc1a6O35544 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc1a6O35544 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Slc1a6O35544 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Slc1a6O35544 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Slc1a6O35544 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Slc1a6O35544 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Slc1a6O35544 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Slc1a6O35544 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc1a6O35544 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc1a6O35544 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc1a6O35544 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc1a6O35544 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc1a6O35544 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Slc1a6O35544 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.22□□□□□ -0.61
Slc1a6O35544 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Slc1a6O35544 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc1a6O35544 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc1a6O35544 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Slc1a6O35544 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.22□□□□□ -0.61
Slc1a6O35544 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.22□□□□□ -0.61
Slc1a6O35544 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc1a6O35544 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Slc1a6O35544 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.22□□□□□ -0.61
Slc1a6O35544 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.22□□□□□ -0.61
Slc1a6O35544 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.22□□□□□ -0.61
Slc1a6O35544 Gm37424-201ENSMUST00000191727 561 ntBASIC11.22□□□□□ -0.61
Slc1a6O35544 Gm37597-201ENSMUST00000191853 382 ntBASIC11.22□□□□□ -0.61
Slc1a6O35544 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.22□□□□□ -0.61
Slc1a6O35544 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Slc1a6O35544 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.22□□□□□ -0.61
Slc1a6O35544 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Slc1a6O35544 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.22□□□□□ -0.61
Slc1a6O35544 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.22□□□□□ -0.61
Slc1a6O35544 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc1a6O35544 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.22□□□□□ -0.61
Slc1a6O35544 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.22□□□□□ -0.61
Slc1a6O35544 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.22□□□□□ -0.61
Slc1a6O35544 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.22□□□□□ -0.61
Slc1a6O35544 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.22□□□□□ -0.61
Slc1a6O35544 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc1a6O35544 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc1a6O35544 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc1a6O35544 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc1a6O35544 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc1a6O35544 Gm9823-201ENSMUST00000051212 327 ntBASIC11.22□□□□□ -0.61
Slc1a6O35544 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.22□□□□□ -0.61
Slc1a6O35544 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc1a6O35544 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Slc1a6O35544 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Slc1a6O35544 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.22□□□□□ -0.61
Slc1a6O35544 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc1a6O35544 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc1a6O35544 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc1a6O35544 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.22□□□□□ -0.61
Slc1a6O35544 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Slc1a6O35544 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc1a6O35544 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Slc1a6O35544 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc1a6O35544 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc1a6O35544 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Slc1a6O35544 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc1a6O35544 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Slc1a6O35544 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc1a6O35544 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc1a6O35544 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Slc1a6O35544 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Slc1a6O35544 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Slc1a6O35544 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc1a6O35544 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc1a6O35544 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Slc1a6O35544 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms