Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf3O08791 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf3O08791 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Ebf3O08791 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf3O08791 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.91□□□□□ -0.5
Ebf3O08791 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ebf3O08791 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf3O08791 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf3O08791 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.91□□□□□ -0.5
Ebf3O08791 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf3O08791 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Ebf3O08791 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf3O08791 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ebf3O08791 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.9□□□□□ -0.5
Ebf3O08791 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ebf3O08791 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.9□□□□□ -0.5
Ebf3O08791 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ebf3O08791 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ebf3O08791 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.9□□□□□ -0.5
Ebf3O08791 Gm15615-201ENSMUST00000118876 198 ntBASIC11.9□□□□□ -0.5
Ebf3O08791 Gm11244-201ENSMUST00000121243 237 ntBASIC11.9□□□□□ -0.5
Ebf3O08791 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Ebf3O08791 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.9□□□□□ -0.5
Ebf3O08791 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 Gm25951-201ENSMUST00000175330 64 ntBASIC11.9□□□□□ -0.5
Ebf3O08791 Gm22877-201ENSMUST00000175451 105 ntBASIC11.9□□□□□ -0.5
Ebf3O08791 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.9□□□□□ -0.5
Ebf3O08791 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.9□□□□□ -0.5
Ebf3O08791 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC11.9□□□□□ -0.5
Ebf3O08791 Gm5298-201ENSMUST00000201122 892 ntBASIC11.9□□□□□ -0.5
Ebf3O08791 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.9□□□□□ -0.5
Ebf3O08791 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.9□□□□□ -0.5
Ebf3O08791 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ebf3O08791 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Ebf3O08791 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 Gm23105-201ENSMUST00000083719 134 ntBASIC11.9□□□□□ -0.5
Ebf3O08791 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ebf3O08791 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Ebf3O08791 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ebf3O08791 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Ebf3O08791 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ebf3O08791 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ebf3O08791 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.9□□□□□ -0.51
Ebf3O08791 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ebf3O08791 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ebf3O08791 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf3O08791 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf3O08791 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.89□□□□□ -0.51
Ebf3O08791 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf3O08791 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf3O08791 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf3O08791 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.89□□□□□ -0.51
Ebf3O08791 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf3O08791 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ebf3O08791 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.89□□□□□ -0.51
Ebf3O08791 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf3O08791 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf3O08791 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Ebf3O08791 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ebf3O08791 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ebf3O08791 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf3O08791 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.89□□□□□ -0.51
Ebf3O08791 Gm14219-201ENSMUST00000120414 288 ntBASIC11.89□□□□□ -0.51
Ebf3O08791 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf3O08791 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.89□□□□□ -0.51
Ebf3O08791 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf3O08791 Mir6407-201ENSMUST00000184510 101 ntBASIC11.89□□□□□ -0.51
Ebf3O08791 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Ebf3O08791 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.89□□□□□ -0.51
Ebf3O08791 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf3O08791 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.89□□□□□ -0.51
Ebf3O08791 Gm3619-201ENSMUST00000219947 775 ntBASIC11.89□□□□□ -0.51
Ebf3O08791 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.89□□□□□ -0.51
Ebf3O08791 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf3O08791 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf3O08791 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.89□□□□□ -0.51
Ebf3O08791 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms