Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc180J3QNE4 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc180J3QNE4 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ccdc180J3QNE4 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc180J3QNE4 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc180J3QNE4 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc180J3QNE4 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc180J3QNE4 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc180J3QNE4 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC20.57■□□□□ 0.88
Ccdc180J3QNE4 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc180J3QNE4 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc180J3QNE4 Gm12986-201ENSMUST00000119037 967 ntBASIC20.57■□□□□ 0.88
Ccdc180J3QNE4 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc180J3QNE4 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc180J3QNE4 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC20.57■□□□□ 0.88
Ccdc180J3QNE4 Snord55-201ENSMUST00000174939 79 ntBASIC20.57■□□□□ 0.88
Ccdc180J3QNE4 AC129975.1-201ENSMUST00000224816 592 ntBASIC20.57■□□□□ 0.88
Ccdc180J3QNE4 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc180J3QNE4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc180J3QNE4 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC20.56■□□□□ 0.88
Ccdc180J3QNE4 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc180J3QNE4 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc180J3QNE4 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ccdc180J3QNE4 Gm13171-201ENSMUST00000117233 391 ntBASIC20.56■□□□□ 0.88
Ccdc180J3QNE4 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC20.56■□□□□ 0.88
Ccdc180J3QNE4 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc180J3QNE4 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc180J3QNE4 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc180J3QNE4 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc180J3QNE4 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ccdc180J3QNE4 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc180J3QNE4 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc180J3QNE4 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC20.56■□□□□ 0.88
Ccdc180J3QNE4 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC20.56■□□□□ 0.88
Ccdc180J3QNE4 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc180J3QNE4 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc180J3QNE4 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc180J3QNE4 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc180J3QNE4 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc180J3QNE4 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ccdc180J3QNE4 Gm7069-201ENSMUST00000182418 1008 ntBASIC20.55■□□□□ 0.88
Ccdc180J3QNE4 Gm27440-201ENSMUST00000184785 107 ntBASIC20.55■□□□□ 0.88
Ccdc180J3QNE4 Gm18001-201ENSMUST00000212023 688 ntBASIC20.55■□□□□ 0.88
Ccdc180J3QNE4 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc180J3QNE4 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ccdc180J3QNE4 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc180J3QNE4 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ccdc180J3QNE4 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc180J3QNE4 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc180J3QNE4 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc180J3QNE4 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc180J3QNE4 Gm38111-201ENSMUST00000194817 2741 ntBASIC20.55■□□□□ 0.88
Ccdc180J3QNE4 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc180J3QNE4 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc180J3QNE4 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc180J3QNE4 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Trav11n-201ENSMUST00000200113 343 ntBASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Gm23769-201ENSMUST00000104441 121 ntBASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Gm33080-201ENSMUST00000205429 172 ntBASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 AC159196.1-201ENSMUST00000225524 377 ntBASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Rps3a2-201ENSMUST00000074245 792 ntBASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Rps3a3-201ENSMUST00000074680 795 ntBASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc180J3QNE4 Gm37160-201ENSMUST00000193081 1689 ntBASIC20.53■□□□□ 0.88
Ccdc180J3QNE4 Gm44755-201ENSMUST00000207830 2102 ntBASIC20.53■□□□□ 0.88
Ccdc180J3QNE4 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ccdc180J3QNE4 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Ccdc180J3QNE4 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc180J3QNE4 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ccdc180J3QNE4 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc180J3QNE4 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Ccdc180J3QNE4 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC20.53■□□□□ 0.88
Ccdc180J3QNE4 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc180J3QNE4 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc180J3QNE4 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC20.53■□□□□ 0.88
Ccdc180J3QNE4 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC20.53■□□□□ 0.88
Ccdc180J3QNE4 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc180J3QNE4 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc180J3QNE4 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms