Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Gm8111-201ENSMUST00000117659 987 ntBASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Gm12856-201ENSMUST00000119471 1293 ntBASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 n-R5s14-201ENSMUST00000122688 107 ntBASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Gm21092-201ENSMUST00000178995 955 ntBASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Gm44315-201ENSMUST00000203041 219 ntBASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cpsf4lE9Q2N0 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cpsf4lE9Q2N0 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cpsf4lE9Q2N0 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cpsf4lE9Q2N0 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Cpsf4lE9Q2N0 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC9.65□□□□□ -0.87
Cpsf4lE9Q2N0 AC158355.1-201ENSMUST00000215895 1705 ntBASIC9.65□□□□□ -0.87
Cpsf4lE9Q2N0 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cpsf4lE9Q2N0 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cpsf4lE9Q2N0 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cpsf4lE9Q2N0 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cpsf4lE9Q2N0 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC9.65□□□□□ -0.87
Cpsf4lE9Q2N0 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Gm14740-201ENSMUST00000118538 1150 ntBASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Gm9211-201ENSMUST00000182882 975 ntBASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Gm23105-201ENSMUST00000083719 134 ntBASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms