Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Gm42449-201ENSMUST00000200349 2258 ntBASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Gm18893-201ENSMUST00000198416 943 ntBASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Gm19994-201ENSMUST00000217086 586 ntBASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.51□□□□□ -0.57
Trim42Q9D2H5 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Gm42971-201ENSMUST00000199228 2079 ntBASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Gm12164-201ENSMUST00000121695 551 ntBASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Gm8602-201ENSMUST00000184045 607 ntBASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Gm6439-201ENSMUST00000199849 862 ntBASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 CT009601.1-201ENSMUST00000225567 2705 ntBASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim42Q9D2H5 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms