Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chaf1bQ9D0N7 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Gm27514-201ENSMUST00000183692 110 ntBASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Gm37489-201ENSMUST00000191883 159 ntBASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Gm6439-201ENSMUST00000199849 862 ntBASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chaf1bQ9D0N7 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chaf1bQ9D0N7 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chaf1bQ9D0N7 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chaf1bQ9D0N7 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chaf1bQ9D0N7 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chaf1bQ9D0N7 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Chaf1bQ9D0N7 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.71□□□□□ -0.7
Chaf1bQ9D0N7 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chaf1bQ9D0N7 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Chaf1bQ9D0N7 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Chaf1bQ9D0N7 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chaf1bQ9D0N7 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Chaf1bQ9D0N7 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Gm15824-201ENSMUST00000119516 955 ntBASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Gm45880-201ENSMUST00000213041 853 ntBASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Chaf1bQ9D0N7 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chaf1bQ9D0N7 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms