Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 AC022682.1-201ENSMUST00000224624 2023 ntBASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Prss23os-202ENSMUST00000179361 1362 ntBASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Gm42970-201ENSMUST00000196407 1352 ntBASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Gm6758-201ENSMUST00000119643 1055 ntBASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Gm4462-201ENSMUST00000166453 492 ntBASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Gm20781-201ENSMUST00000193154 693 ntBASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Gm21736-201ENSMUST00000195399 693 ntBASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cldnd1Q9CQX5 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Gm43167-201ENSMUST00000202001 1606 ntBASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Gm33707-201ENSMUST00000195135 569 ntBASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Gm35960-201ENSMUST00000202712 767 ntBASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 AC134537.1-201ENSMUST00000219205 265 ntBASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Gm26782-203ENSMUST00000227103 751 ntBASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 AC169511.1-201ENSMUST00000227639 995 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms