Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Gm10390-202ENSMUST00000181905 4269 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Tusc5-201ENSMUST00000062024 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Itsn1-204ENSMUST00000113993 3787 ntTSL 5 BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Zfp189-201ENSMUST00000042964 2835 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Papolg-202ENSMUST00000102863 2171 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Gm11960-201ENSMUST00000122068 925 ntBASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Gm45612-201ENSMUST00000211320 160 ntBASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Ppcdc-201ENSMUST00000085709 2744 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Rffl-204ENSMUST00000093975 3575 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Serpina3m-201ENSMUST00000101078 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Serpina3m-202ENSMUST00000168797 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Kcnk2-201ENSMUST00000079451 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Cdh16-201ENSMUST00000163783 2910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Gtf2a1Q99PM3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Brcc3-201ENSMUST00000033544 4310 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Gm44741-201ENSMUST00000207503 2127 ntBASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Pi4ka-211ENSMUST00000154364 6630 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Gm44926-201ENSMUST00000207898 1826 ntBASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Gm31983-202ENSMUST00000210553 3155 ntTSL 5 BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Krt78-201ENSMUST00000164932 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Gm16202-201ENSMUST00000117532 544 ntBASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Gm11745-201ENSMUST00000121669 448 ntBASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Zbtb37-201ENSMUST00000159250 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Ctage5-220ENSMUST00000177225 2872 ntTSL 5 BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Kirrel3-208ENSMUST00000188933 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Gm37459-201ENSMUST00000192259 2840 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Tcf7l2-208ENSMUST00000111654 3059 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Mmgt1-201ENSMUST00000059899 4234 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf2a1Q99PM3 Gm10857-201ENSMUST00000195343 2794 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Gtf2a1Q99PM3 Gm38148-201ENSMUST00000195166 3012 ntBASIC12.4□□□□□ -0.43
Gtf2a1Q99PM3 Gm5592-201ENSMUST00000097044 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Gtf2a1Q99PM3 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Gtf2a1Q99PM3 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Gtf2a1Q99PM3 Zfp942-202ENSMUST00000091879 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Gtf2a1Q99PM3 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Gtf2a1Q99PM3 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Gtf2a1Q99PM3 Gm26773-201ENSMUST00000180772 2868 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Gtf2a1Q99PM3 Zfp936-203ENSMUST00000202535 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Gtf2a1Q99PM3 Slc22a21-201ENSMUST00000076493 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Mmel1-201ENSMUST00000079269 2934 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 AC124561.1-202ENSMUST00000228652 1929 ntBASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Atp2b2-202ENSMUST00000101044 4586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Gtf2a1Q99PM3 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms