Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trem2Q99NH8 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.63□□□□□ -0.55
Trem2Q99NH8 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trem2Q99NH8 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.63□□□□□ -0.55
Trem2Q99NH8 Gm11244-201ENSMUST00000121243 237 ntBASIC11.63□□□□□ -0.55
Trem2Q99NH8 Gm15329-201ENSMUST00000121408 155 ntBASIC11.63□□□□□ -0.55
Trem2Q99NH8 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trem2Q99NH8 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.63□□□□□ -0.55
Trem2Q99NH8 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.63□□□□□ -0.55
Trem2Q99NH8 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.63□□□□□ -0.55
Trem2Q99NH8 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trem2Q99NH8 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.63□□□□□ -0.55
Trem2Q99NH8 Gm7741-201ENSMUST00000181445 989 ntBASIC11.63□□□□□ -0.55
Trem2Q99NH8 Mir6420-201ENSMUST00000185032 102 ntBASIC11.63□□□□□ -0.55
Trem2Q99NH8 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trem2Q99NH8 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.63□□□□□ -0.55
Trem2Q99NH8 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.63□□□□□ -0.55
Trem2Q99NH8 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.63□□□□□ -0.55
Trem2Q99NH8 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.63□□□□□ -0.55
Trem2Q99NH8 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trem2Q99NH8 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trem2Q99NH8 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.63□□□□□ -0.55
Trem2Q99NH8 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trem2Q99NH8 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trem2Q99NH8 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trem2Q99NH8 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trem2Q99NH8 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trem2Q99NH8 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trem2Q99NH8 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trem2Q99NH8 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trem2Q99NH8 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trem2Q99NH8 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trem2Q99NH8 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trem2Q99NH8 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trem2Q99NH8 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trem2Q99NH8 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trem2Q99NH8 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trem2Q99NH8 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.62□□□□□ -0.55
Trem2Q99NH8 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.62□□□□□ -0.55
Trem2Q99NH8 Gm23251-201ENSMUST00000103773 110 ntBASIC11.62□□□□□ -0.55
Trem2Q99NH8 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trem2Q99NH8 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.62□□□□□ -0.55
Trem2Q99NH8 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.62□□□□□ -0.55
Trem2Q99NH8 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
Trem2Q99NH8 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.62□□□□□ -0.55
Trem2Q99NH8 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.62□□□□□ -0.55
Trem2Q99NH8 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.62□□□□□ -0.55
Trem2Q99NH8 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Olfr584-201ENSMUST00000098210 964 ntBASIC11.62□□□□□ -0.55
Trem2Q99NH8 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.62□□□□□ -0.55
Trem2Q99NH8 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trem2Q99NH8 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trem2Q99NH8 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.61□□□□□ -0.55
Trem2Q99NH8 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trem2Q99NH8 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trem2Q99NH8 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.61□□□□□ -0.55
Trem2Q99NH8 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trem2Q99NH8 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trem2Q99NH8 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trem2Q99NH8 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Trem2Q99NH8 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms