Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chmp1b1Q99LU0 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Gm23596-201ENSMUST00000104304 132 ntBASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Gm11509-201ENSMUST00000117358 325 ntBASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Gm16505-201ENSMUST00000179981 232 ntBASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chmp1b1Q99LU0 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Gm11663-201ENSMUST00000117888 290 ntBASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Gm15207-201ENSMUST00000119259 442 ntBASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Gm12266-201ENSMUST00000120311 962 ntBASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Gm26047-201ENSMUST00000157308 113 ntBASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Gm9192-201ENSMUST00000183221 985 ntBASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Gm37666-201ENSMUST00000194110 866 ntBASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Gm38117-201ENSMUST00000194653 939 ntBASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Gm26047-202ENSMUST00000198840 115 ntBASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Gm270-201ENSMUST00000223010 976 ntBASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms