Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Snord83b-201ENSMUST00000104546 94 ntBASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Tceal9-202ENSMUST00000113115 888 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Gm14791-201ENSMUST00000119061 1166 ntBASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Gm13297-201ENSMUST00000120205 934 ntBASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Gm1848-201ENSMUST00000120711 789 ntBASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Gm12978-201ENSMUST00000121250 522 ntBASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Gm7584-201ENSMUST00000175829 940 ntBASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Gm29516-201ENSMUST00000190402 468 ntBASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Gm38341-201ENSMUST00000195357 515 ntBASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Gm42783-201ENSMUST00000197075 795 ntBASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Gm34165-201ENSMUST00000222012 1174 ntBASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 AC116589.4-201ENSMUST00000222390 216 ntBASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Gm6092-201ENSMUST00000121659 2029 ntBASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhb3Q91XZ7 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Gm10434-201ENSMUST00000101158 471 ntBASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Gm11439-201ENSMUST00000118598 409 ntBASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Gm13499-201ENSMUST00000142804 603 ntTSL 3 BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Gm28941-201ENSMUST00000185536 1017 ntBASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Gm42591-201ENSMUST00000197249 700 ntBASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Gm45258-201ENSMUST00000210042 853 ntBASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Gm45865-201ENSMUST00000211815 945 ntBASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Gm19885-201ENSMUST00000212853 343 ntBASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Gm10608-202ENSMUST00000213924 676 ntBASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Gm35135-201ENSMUST00000219885 990 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms