Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Gm16219-201ENSMUST00000120096 274 ntBASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Gm10169-201ENSMUST00000121822 348 ntBASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Gm6407-201ENSMUST00000176468 549 ntBASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx39aQ8VDW0 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Gm15374-201ENSMUST00000119313 844 ntBASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Gm3726-201ENSMUST00000203110 785 ntBASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Mt1-202ENSMUST00000211807 1085 ntBASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Gm45856-201ENSMUST00000212752 416 ntBASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx39aQ8VDW0 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 Rgr-203ENSMUST00000225070 4704 ntBASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 Gm25148-201ENSMUST00000104611 123 ntBASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 Gm14270-201ENSMUST00000118388 846 ntBASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 Gm12990-201ENSMUST00000120372 468 ntBASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 Gm14219-201ENSMUST00000120414 288 ntBASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 Gm24992-201ENSMUST00000157412 130 ntBASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 Gm21778-201ENSMUST00000178779 471 ntBASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ddx39aQ8VDW0 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms