Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.91□□□□□ -0.66
CroccQ8CJ40 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.91□□□□□ -0.66
CroccQ8CJ40 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.91□□□□□ -0.66
CroccQ8CJ40 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.91□□□□□ -0.66
CroccQ8CJ40 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CroccQ8CJ40 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.91□□□□□ -0.66
CroccQ8CJ40 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Ginm1-202ENSMUST00000065124 300 ntBASIC10.91□□□□□ -0.66
CroccQ8CJ40 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CroccQ8CJ40 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.91□□□□□ -0.66
CroccQ8CJ40 Gm6335-201ENSMUST00000118081 1194 ntBASIC10.91□□□□□ -0.66
CroccQ8CJ40 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.91□□□□□ -0.66
CroccQ8CJ40 Gm7816-201ENSMUST00000119884 1194 ntBASIC10.91□□□□□ -0.66
CroccQ8CJ40 Gm15542-201ENSMUST00000121585 1194 ntBASIC10.91□□□□□ -0.66
CroccQ8CJ40 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Gm37458-201ENSMUST00000194055 410 ntBASIC10.91□□□□□ -0.66
CroccQ8CJ40 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CroccQ8CJ40 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CroccQ8CJ40 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.9□□□□□ -0.66
CroccQ8CJ40 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.9□□□□□ -0.66
CroccQ8CJ40 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.9□□□□□ -0.66
CroccQ8CJ40 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Gm43058-201ENSMUST00000197645 625 ntBASIC10.9□□□□□ -0.66
CroccQ8CJ40 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
CroccQ8CJ40 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
CroccQ8CJ40 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
CroccQ8CJ40 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.9□□□□□ -0.67
CroccQ8CJ40 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.9□□□□□ -0.67
CroccQ8CJ40 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CroccQ8CJ40 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CroccQ8CJ40 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.9□□□□□ -0.67
CroccQ8CJ40 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC10.9□□□□□ -0.67
CroccQ8CJ40 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
CroccQ8CJ40 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
CroccQ8CJ40 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
CroccQ8CJ40 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms