Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Gm37008-201ENSMUST00000195712 319 ntBASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Gm8956-201ENSMUST00000203939 825 ntBASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Gm4607-201ENSMUST00000206649 577 ntBASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Gm10463-202ENSMUST00000195772 2889 ntBASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Erich3-203ENSMUST00000189969 3460 ntBASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Gm12015-201ENSMUST00000117065 843 ntBASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Gm14660-201ENSMUST00000119809 575 ntBASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Gm6266-201ENSMUST00000203844 806 ntBASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc28bQ8CEG5 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Gm42971-201ENSMUST00000199228 2079 ntBASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Gm15004-201ENSMUST00000119192 630 ntBASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Gm17150-201ENSMUST00000165577 381 ntBASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.29□□□□□ -0.6
Ccdc28bQ8CEG5 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms