Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lrif1Q8CDD9 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Gm7722-201ENSMUST00000120646 741 ntBASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Gm24845-201ENSMUST00000158034 109 ntBASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Gm26461-201ENSMUST00000175064 290 ntBASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Gm2260-201ENSMUST00000184965 657 ntBASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Gm32999-201ENSMUST00000192693 562 ntBASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Gm19208-201ENSMUST00000213861 912 ntBASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.31□□□□□ -0.6
Lrif1Q8CDD9 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lrif1Q8CDD9 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms